Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1999 ATGGAGCTCCATTACATGCACATACGCACCTCTGATGGAGTCTCACTACATAAGTTGGCCATTGAACGAAGAAATTCTATGTCAGGTAGTGATGAAGCAAATGTACAACATAAAGCAAATGTTGTTGCATCTGAAAGGATTTCAGAGGGTGATCCTTCGGAAAAGATAACCCAGAGATGCACCCTTTCGCTAAAAGAGATAGATGTTTATGATAGTAGATGTGTACTATGCAGCGAACGAGATTTCAACAATGATGAATTTGGTCCTCGGACAGTAATGATTTGTGAGCAGTGTGAGAAGGAATATCACGTTGGGTGTTTGAACGATCGTAACATGGCTAACCTAGAGAAATTACCTGAAGATGAATGGTTTTGCGGCGTAGATTGTGATGATATTCATATGAAACTGCAAAAATTAATGGCTCGTGGGGAAGCACGTCTTTCAGATTCCCTTCTAAGTTTGATTAAAAAGAAGCAAGAAGAAAAAGGCCTTGAAACTGAATTGGGTCTTGATGTAAAATGGAGGGTTTTCAACTGGAAGTTGAATGATTATGAATTGCTTTCCAATGTTGTTGATATCTTTCATTGCTCACTGTCAAGTAAGTCTGAGTGTGGAGTATGTTTTGTTGCTAATTGCTTATTTCATTCGAAATGGTACTTGATTTTGGTGTGTATTACATCGTTTTACAGCCAAGCGGTTGTATGTGCTGGGATATTCCGCGTGTTCGGGCAAGAAGTGGCGGAGCTTCCCTTAATTGCAACTAGGGCCAAATACCAAGGACAGGGTTACTTCCAGTCCCTGCTTTCTTGCATAGAGAATGTTCTTGGACACTGGAAAATAAAAAGATTAGTCCTACCAGCAGCTCACGAAGCTGAGTCAATGTGGACAAATAAATTCGGGTTTACAAAGCCAGACCAAGAGGAGATGAACCATTTTGGGAGATTGTACCATAATATGATGATATTTGATGGAACGTCCTTACTACAGAAGTTGGTTCCTCCGCCTCTAGAAGGGTGTTGA 1020 0.4059 MELHYMHIRTSDGVSLHKLAIERRNSMSGSDEANVQHKANVVASERISEGDPSEKITQRCTLSLKEIDVYDSRCVLCSERDFNNDEFGPRTVMICEQCEKEYHVGCLNDRNMANLEKLPEDEWFCGVDCDDIHMKLQKLMARGEARLSDSLLSLIKKKQEEKGLETELGLDVKWRVFNWKLNDYELLSNVVDIFHCSLSSKSECGVCFVANCLFHSKWYLILVCITSFYSQAVVCAGIFRVFGQEVAELPLIATRAKYQGQGYFQSLLSCIENVLGHWKIKRLVLPAAHEAESMWTNKFGFTKPDQEEMNHFGRLYHNMMIFDGTSLLQKLVPPPLEGC* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1999 339 SUPERFAMILY FYVE/PHD zinc finger 66 127 IPR011011 -
Mal7g1999 339 CDD NAT_SF 234 285 - -
Mal7g1999 339 PANTHER AUTOIMMUNE REGULATOR 32 333 - -
Mal7g1999 339 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 222 316 IPR016181 -
Mal7g1999 339 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 32 333 - -
Mal7g1999 339 Gene3D - 171 329 - -
Mal7g1999 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 132 IPR013083 -
Mal7g1999 339 SMART PHD_3 73 130 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1999 Mal-Chr7 72101448 72103772 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1999 30 332 PHD Transcription Factor Family AT2G36720 39.744 5.21e-71 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1999 - - mtr:MTR_4g050090 377.481