Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1996 ATGGCGATTGCTGGTTTGCATAGTGTGTCTGTGCTCGATTCGTCGTTCTTGAGGGACTCGCAGTCTCAGGCGTCGAGGAGGGGAGATGGGAGAAGTGGAAGTACACGGTCATCTTCGCTTTTGCAAATGTGGCGGGAGATTGAGGATGAACATGCGGTGAGTCAAGTTCAAGGAAGAGCAGGTGAAGTAGTGCTTGAACGAAGGAATAATGGGTCGATTGTGGATGTTTCGTTAGAAGATGCACCTTATAGCCCAGAGATAGGAAAGAGGCGTGGTTTGGAAGATGCAATTTTGGGTGAGAGTGAGTCGGATACATGGTCACAGTCGCAAAGTCAGAATGAATCTGTTGATGGTCATGAGGATTTGAACAATTCTAGCTGTGAAAACTCTTCTGTTTTCGGAGAAGTTGAAAGGGAAAGAGTGAGGCGAATTTTCAGGGAATGGATGAATAATGGATCTAGGGATTGTGGGCCAAACATTTCCCGGAGAAGTGAAAGTCCACGGGGAGAATGGCTTGGAGAAACCGAACAAGAAAGGGTGAGAGTTATAAGGGAGTGGGTACAAACGAGCAGCCAGCAGAGAAGTGTTTCTTCGGGGGAAAACAGGGAGCAGCCACGTGCTGAAATTGGTGCACAAATCGAACGTGTGCGCGATGGATTGGTCGTTAACCACACTGAGGGACAAAATGAGCATATACGGAGGGGTATGCGTAAATTACGTGGCAGACAGGTAATGCTTGATATGCTTAAGAAGGGTGAGAGGGAAAGGCAGAGAGAAATTCAGGAGTTGCTGGACCATCAGGCTGTATCACGTTTTCCCCATCGCAATCGCATTCAGGCATTGCTTAGAGGCAGGTTCTTGAGAAATGATAGGTCTGTTGACCATAACAGGTCTGCATCTGTAGCAGAAAGTGAATTAGGCTTATTGAGGCAAAGACAAACTGTATCAGGTCTAAGGGAAGGATTCTTCTCTAGAATGGACAGTACAGGTTGCAGCCAAGCAACCAGCAACCTATCTGATACCTCATCAAACATTGATATTGATTTTAATACAAATGAGCAGAATGGAGAAAGCAGTTCATGTATGGTCGTTGAACCTAATAACATAAGAGGTGATAGGGTTGGGATGTCTGGTGGCCACTCTCTAGGAGTTACATGTGAGAGTTTAGATTGTCAAGAATCTACTGCCCATGCAGAAGGTAATCAGTTGCAGTGCTTACAAATTGAGTCAGTAGATAGGCAGTCATCATTCAGTGATGGGTGTGAAAGAAGAGATTACACTGGGCAAAATGTTGATGTGCTGTCAATCGGAGATAAAGCTGATGAACTTATCCAACAAAGCTTACAAATTGATGATTCAGATCATAGTAATAATCAGGAATCCAGCGAGGTACATACAGATCATAGTGATATAAGTAATGGTGAAAACAATTCATCAAATCACGGTGATTATACAGAGAGCAATGCTGTTGATGATGTGATTGGATCTGGCACTCTAGAAGAACAGCTGGAAGAAATTGTTGAAAATGAAAGAAGTGGCTGGCATCAGAGTAACACTGAATGGAGAGACAGCACCTATGAAAGTGTGGATGATAATCAGCTCAGCAATACAGCAAATGAGTGGCCTGAGAACAGTTGGGCAAATGAGGATGTAGAAAACCCTCGTCTGCAAGAAGCTTCTGAAGTGTGGCAAGAGGATAGTGGCTTCCAAGAGGCCGTGGAAAATTGGTTGGGAGGACCTTCTGACCATGAAACTGCTCCTGGTGGTAGAGTTCAGAGTTTTTATTTTCCTGATGATGACAATGTATACAGTGTTGAACTCAGGGAACTTCATAGTAGGAGACGTGTCTCTAATCTCCTCGGAAGTAGTTTCCGTGAGAGTCTTGACCAGTTGATACAATCATATGTTGAAAGACAGGGTCACGCTAACATGGAGTGGGATCCGGAAGAAGAAACTCCTTCTGCTAACCTTGGGCAGCAAAGTCGAGATCAGATTGTCGATCAGGAGGGTACTATTAATAGTCCACATGACTTGCCATCTTTGCCTACACCTCCTACTCCACCTCTTTGGGATCAGCATCCTCATGGTGATAACTGGTCACACAATGATGATTTGGAAATTATTAATGACTTGAGACTTGACATGGCTAGATTACAGCAAAGGATGAATGCTATGCAGAGGATGCTTGAGGCATGTATGGATATGCAGCTTGAGCTGCAACGTTCAATAAAACAAGAAGTTTCTGCAGCACTAAATCGCTCAGCTGGTTCATCAGGAATACATGAATGTGATTCACCAGATGACAATCTTAAATGGGAATGTGTGAGGAAAGGACTTTGCTGTATTTGCTGTGAAAGCAATATTGATTCTTTGTTGTACAGATGTGGCCATTTGTGCACGTGTTCAAGATGTGCCAATGAGTTGCTTCAAAGTAGAAGGAATTGCCCAATGTGTCACGCCCCTGTGTTGGAGGTGATACGTACTTATTCCATACTATAA 2499 0.4402 MAIAGLHSVSVLDSSFLRDSQSQASRRGDGRSGSTRSSSLLQMWREIEDEHAVSQVQGRAGEVVLERRNNGSIVDVSLEDAPYSPEIGKRRGLEDAILGESESDTWSQSQSQNESVDGHEDLNNSSCENSSVFGEVERERVRRIFREWMNNGSRDCGPNISRRSESPRGEWLGETEQERVRVIREWVQTSSQQRSVSSGENREQPRAEIGAQIERVRDGLVVNHTEGQNEHIRRGMRKLRGRQVMLDMLKKGERERQREIQELLDHQAVSRFPHRNRIQALLRGRFLRNDRSVDHNRSASVAESELGLLRQRQTVSGLREGFFSRMDSTGCSQATSNLSDTSSNIDIDFNTNEQNGESSSCMVVEPNNIRGDRVGMSGGHSLGVTCESLDCQESTAHAEGNQLQCLQIESVDRQSSFSDGCERRDYTGQNVDVLSIGDKADELIQQSLQIDDSDHSNNQESSEVHTDHSDISNGENNSSNHGDYTESNAVDDVIGSGTLEEQLEEIVENERSGWHQSNTEWRDSTYESVDDNQLSNTANEWPENSWANEDVENPRLQEASEVWQEDSGFQEAVENWLGGPSDHETAPGGRVQSFYFPDDDNVYSVELRELHSRRRVSNLLGSSFRESLDQLIQSYVERQGHANMEWDPEEETPSANLGQQSRDQIVDQEGTINSPHDLPSLPTPPTPPLWDQHPHGDNWSHNDDLEIINDLRLDMARLQQRMNAMQRMLEACMDMQLELQRSIKQEVSAALNRSAGSSGIHECDSPDDNLKWECVRKGLCCICCESNIDSLLYRCGHLCTCSRCANELLQSRRNCPMCHAPVLEVIRTYSIL* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1996 832 Coils Coil 708 735 - -
Mal7g1996 832 MobiDBLite consensus disorder prediction 100 131 - -
Mal7g1996 832 CDD mRING-HC-C3HC5_NEU1 780 818 - -
Mal7g1996 832 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 768 830 IPR013083 -
Mal7g1996 832 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 703 831 - -
Mal7g1996 832 MobiDBLite consensus disorder prediction 450 489 - -
Mal7g1996 832 MobiDBLite consensus disorder prediction 471 486 - -
Mal7g1996 832 MobiDBLite consensus disorder prediction 101 131 - -
Mal7g1996 832 PANTHER PROTEIN, PUTATIVE-RELATED 703 831 - -
Mal7g1996 832 PANTHER PROTEIN, PUTATIVE-RELATED 1 704 - -
Mal7g1996 832 ProSiteProfiles Zinc finger RING-type profile. 780 819 IPR001841 -
Mal7g1996 832 MobiDBLite consensus disorder prediction 456 470 - -
Mal7g1996 832 MobiDBLite consensus disorder prediction 17 38 - -
Mal7g1996 832 MobiDBLite consensus disorder prediction 153 174 - -
Mal7g1996 832 Pfam Zinc finger, C3HC4 type (RING finger) 777 824 - -
Mal7g1996 832 SUPERFAMILY RING/U-box 779 826 - -
Mal7g1996 832 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1996 Mal-Chr7 71838984 71845945 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1996 7 71838984 71845945 Mal7g1996 7 71838984 71845945 ECH
Mal4g0849 4 10247404 10253836 Mal7g1996 7 71838984 71845945 PCT