Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1995 ATGGAATTTTACAACCGCAGGTTGCTTCTACTCAACGAGGATGTTCCAATCTCAACATCCATATCACCTTTCCCTCAAATCCAACCAAATGCATCCTCACCGTCCATTTCAATCACACCCCCATCCAAATCATTCACACCCCCTCTACAACTACAATTATCATTCCATCCAATATTCTCTTCCAACATAGCTTACATCTTTCTCCTCCTCTTCTCCACCCTTTTCTTCCTTGCCTTCATCCTCTTATCATTCCGTGAACTCTCTTTCCGACGCCGGCGTAGATTCTCACCGCTGCAGGGTTTGAATCCTGCTGCGGTGAAATCTCTGCCGGTGTGTGAGTACAAGGAAGATGTTAAGCAACCGGACTGTGTGATATGTTTGGAAGAGTTCGAAGATGGTGAGGAGGTGAAGATGGTTCCGTATTGTAAGCACGTGTTTCATACTGAGTGTATTGACACGTGGCTTTCTGCACACGTCACGTGCCCTATTTGCAGGTGCGTTATTATTATGGATGATGTAAAGAAAGATACAGATGAGCATGTGGGAAGATCAACGGTTGAGATTAGAGGAGATGGAGAAACGGGGTAG 588 0.4541 MEFYNRRLLLLNEDVPISTSISPFPQIQPNASSPSISITPPSKSFTPPLQLQLSFHPIFSSNIAYIFLLLFSTLFFLAFILLSFRELSFRRRRRFSPLQGLNPAAVKSLPVCEYKEDVKQPDCVICLEEFEDGEEVKMVPYCKHVFHTECIDTWLSAHVTCPICRCVIIMDDVKKDTDEHVGRSTVEIRGDGETG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1995 195 SMART ring_2 123 164 IPR001841 -
Mal7g1995 195 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Mal7g1995 195 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 35 175 - -
Mal7g1995 195 SUPERFAMILY RING/U-box 107 171 - -
Mal7g1995 195 CDD RING-H2_PA-TM-RING 122 165 - -
Mal7g1995 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 170 IPR013083 -
Mal7g1995 195 Pfam Ring finger domain 122 165 IPR001841 -
Mal7g1995 195 SMART ringv_2 122 165 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1995 Mal-Chr7 71834270 71834857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1995 59 172 C3H Transcription Factor Family AT2G27940 38.194 2.90e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1995 - K10664 mtr:MTR_4g056590 300.056