Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1985 ATGTCTCGTCGCGGCGGCGCAAACCATCCCGATCCTCGCCGTAACCAACCTTCTCCGGCGATTTCACAACAATCATCCGTCAATGCTGCAGGATCAGGCCGTGGCGGTCGTTCTGGCGGTGGTCGTGGTTCACGCGGCGGACACACCGTTCCGTCTCCATCATCTGTTCCCGCACCGGTTCCGGTAAACGTTGCTTCATCAACCGCAGCGCCGGTTGTCGCTGGTTCGAGTTCTGCGCCTACGCTTCCGTCTCCGTCTCCGTCTCCGGCGACGGTTTCGACCGAAGCGCTGAGTACTGAGGTTGAAAAAAAGCTTACGCTGGAATCGGCTCCGGCGGCTTCGGCTCCGTCGTCGCAGAAGGCGGCCAGGTTCCCTAACCGACCTGGTTTCGGTCGATCAGGAAGGAAGATTCAAGTTCGTGCTAATCATTTCCAGTTGCAAGTCGCTGATAAGGATCTACATCATTACGATGTATCAATTGCGCCGGAAATTACTTCTAAGAAAGTGTCCAGGGATGTTATCAATCAGTTAGTTAAAATGCATCAGGAGTCCATGCTTGGGAATCGGATTCCTGCCTATGATGGGAGGAAGACTCTGTTTACTGCTGGTCCTTTACCCTTTACTTCAAAGGTTTTTGTGATTAACTTGGTTGATGACAACAAAGGATCCTCTTCTGGTTCAGATAAGAAAAAGCGTGAACGCGAGTTTAAGGTTACAATTAAGTTTGCTTCAAAGACGGACCTGTTCGGTCTTAATCAGTTTCTCCGTCGTTTGCAGCTGGATTGTCCTTATGAAACCATACAAGCTCTTGATATTGCTTTGCGGGCGACTCCTTCTGAAATGTATACTGTTTCTGGAAGGTCATTTTTCTCTCCCAGTTTGGGGGCACAGGGGCCTCTTGGCGGTGGGACAGAATATTGGAGAGGCTATTATCAAAGCCTTAGGCCAACACAAATGGGATTGTCCCTCAATATTGATGTTTCTTCGAGGGCGTTTTATGAACCAATTCGTGTGACTGACTTTGTTTCTAAGAATTTTAAGTTGAATTTTTCAAGGCCACTGTCTGACCAAGACCGTGTCAAGATCAAGAAAGCTTTGAGAGGTCTTAGGGTAAGAACATCTCATGGAGGTAACATAAGAAGTTACAAGGTGACCGGTATCTCAAAAGAACCACTCAGAGATCTAACGTTCAAGCTTGATGATAAAGTAACTCGGAAAAAAATTGCTGATTATTTCTATGAGAAATACAATATTGTGTTAGAGTATCCACTTCTTCCTGCTCTACAAGCTGGAAGTGACACGAGGCCTATGTTTATTCCAATGGAGCTTTGTCAAATTGAGTCTGGACAAAGGTACTCCAAAAGATTGAATGAAGAGCAAGTTACTAATCTTTTAAGGGCCACCTGTCAGCGTCCCCATCAGAGAGAAAATGATATTAAACATATCGTGAAACAGCACCGTTTTAACACAGACAAGGTGGTACGTGAGTTTGGTATCAGTGTAAGGGAGGAACCTGCTTTGGTTGATGCTCGTGTTTTGCCTCCCCCAACGCTTAAGTATCATGGAAATGGTGGAGATTCAAAAATTGACCCCAGGATGGGTCAATGGAATATGATTAAACATAAAATGGTTGATGCTGGCAAGGTGCAATTTTGGAGTTGCCTTTGCTTCTCTAGAATGAACCCGACTCAATTTTGTACCGAGTTGATTAATATGTGTCAAGCCAAGGGAATAATTTTCAATCGAGATCCTTTGGTACCAATTGCCCCAGCCAATTCAAATCAAATTGAGAAAGAGCTTACGGAACTTAACAAGAAATGCATGGCAAAACTTGATAGCACAAAGAAGGAGAGGCTACAATTATTGATAATAATTTTGCCTGATTTCAAGGGGAGGTTTTATGATGAAATAAAGCGTGTATGTGAAACTAGATTAGGAATTGTGACTCAATGTTGTCAGCCAAGGCAAGCAACAAAGATGAATAAACAGTATCTGGAGAATTTGGCTTTGAAGATTAATGTTAAGGTTGGTGGCCGCAACACGGTGTTGAATGATGCTTTTGAGAAAAATATTCCTCTTGTAACAGATGTGCCAACAATAATATTTGGTGCGGATGTAACACATCCTCAGCCAGGGGAGGATTCAAGTCCCTCAATAGCTGCAGTGGTGGCATCCATGGATTGGCCTTGGGTCACGAAGTACAGGGGAATGGTTTCTGCCCAGTCTCATCGGGAAGAAATTATTCAAGATCTGTACAAAACAACAGAACATCCTCAGAAAGGAATTGTGCATAGTGGAATGATTAGGGAGTTAATTGTGGCTTTCTATAAATCAACTGGGCACAAGCCCAAGAGGATCATATTTTACAGAGATGGCGTAAGTGAAGGGCAGTTCAGTCAGGTTTTGCTTTATGAGATGGATGCAATTCGAAAGGCTTGTGTCTCATTAGAGAATGGGTATCTACCAAGAGTTACTTTTGTGGTGGTCCAAAAGAGACATCACACCCGCCTCTTTCCCACAAGTAATGATCAGACTGATCGAAGTGGCAATATAATGCCAGGAACTGTGGTAGACACAGCCATTTGCCATCCCAGGGAATTTGATTTTTATCTGAACAGCCATGCCGGGATTCAAGGGACTAGTCGACCAACACATTATCATGTGTTGTTTGATGAAAATAACTTCAGTGCTGATCAGTTACAGTGTTTGACCAATAACTTATGTTACACTTATGCAAGGTGTACTCGTTCAGTGTCGATAGTTCCTCCTGCTTATTATGCACACTTGTTAGCTTTTCGAGCTCGCTACTACCTTAATGAAGTTGATACTTCTGATTCCGGTTCTGCAAGTGGGAACAGGAGTACCGCTAACTTTGTGTCGACACTGCCCTTGATTATGGAGAATGTCAAGGAAGTTATGTTTTACTGTTGA 2931 0.4398 MSRRGGANHPDPRRNQPSPAISQQSSVNAAGSGRGGRSGGGRGSRGGHTVPSPSSVPAPVPVNVASSTAAPVVAGSSSAPTLPSPSPSPATVSTEALSTEVEKKLTLESAPAASAPSSQKAARFPNRPGFGRSGRKIQVRANHFQLQVADKDLHHYDVSIAPEITSKKVSRDVINQLVKMHQESMLGNRIPAYDGRKTLFTAGPLPFTSKVFVINLVDDNKGSSSGSDKKKREREFKVTIKFASKTDLFGLNQFLRRLQLDCPYETIQALDIALRATPSEMYTVSGRSFFSPSLGAQGPLGGGTEYWRGYYQSLRPTQMGLSLNIDVSSRAFYEPIRVTDFVSKNFKLNFSRPLSDQDRVKIKKALRGLRVRTSHGGNIRSYKVTGISKEPLRDLTFKLDDKVTRKKIADYFYEKYNIVLEYPLLPALQAGSDTRPMFIPMELCQIESGQRYSKRLNEEQVTNLLRATCQRPHQRENDIKHIVKQHRFNTDKVVREFGISVREEPALVDARVLPPPTLKYHGNGGDSKIDPRMGQWNMIKHKMVDAGKVQFWSCLCFSRMNPTQFCTELINMCQAKGIIFNRDPLVPIAPANSNQIEKELTELNKKCMAKLDSTKKERLQLLIIILPDFKGRFYDEIKRVCETRLGIVTQCCQPRQATKMNKQYLENLALKINVKVGGRNTVLNDAFEKNIPLVTDVPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPWVTKYRGMVSAQSHREEIIQDLYKTTEHPQKGIVHSGMIRELIVAFYKSTGHKPKRIIFYRDGVSEGQFSQVLLYEMDAIRKACVSLENGYLPRVTFVVVQKRHHTRLFPTSNDQTDRSGNIMPGTVVDTAICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENNFSADQLQCLTNNLCYTYARCTRSVSIVPPAYYAHLLAFRARYYLNEVDTSDSGSASGNRSTANFVSTLPLIMENVKEVMFYC* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1985 976 Gene3D paz domain 330 452 - -
Mal7g1985 976 CDD Piwi_ago-like 492 938 IPR045246 -
Mal7g1985 976 MobiDBLite consensus disorder prediction 1 129 - -
Mal7g1985 976 SMART Piwi_a_2 621 939 IPR003165 GO:0003676
Mal7g1985 976 Gene3D - 512 685 - -
Mal7g1985 976 ProSiteProfiles PAZ domain profile. 336 448 IPR003100 GO:0005515
Mal7g1985 976 SUPERFAMILY Ribonuclease H-like 608 940 IPR012337 -
Mal7g1985 976 Pfam Piwi domain 622 938 IPR003165 GO:0003676
Mal7g1985 976 ProSiteProfiles Piwi domain profile. 621 939 IPR003165 GO:0003676
Mal7g1985 976 Pfam PAZ domain 360 465 IPR003100 GO:0005515
Mal7g1985 976 Pfam Argonaute linker 1 domain 286 334 IPR014811 -
Mal7g1985 976 SUPERFAMILY PAZ domain 331 488 IPR036085 GO:0005515
Mal7g1985 976 SMART PAZ_2_a_3 340 467 IPR003100 GO:0005515
Mal7g1985 976 CDD PAZ_argonaute_like 335 446 - -
Mal7g1985 976 Gene3D - 691 976 IPR036397 GO:0003676
Mal7g1985 976 Pfam Argonaute linker 2 domain 474 520 IPR032472 -
Mal7g1985 976 PANTHER PROTEIN ARGONAUTE 1D 67 954 - -
Mal7g1985 976 Pfam N-terminal domain of argonaute 135 274 IPR032474 -
Mal7g1985 976 MobiDBLite consensus disorder prediction 15 32 - -
Mal7g1985 976 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 67 954 - -
Mal7g1985 976 SMART DUF1785_2 283 335 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1985 Mal-Chr7 71335895 71342297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1985 70 976 Eukaryotic Initiation Factors Gene Family AT1G48410 56.731 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1985 K11593 - gmx:100799033 1239.94