Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1984 ATGATAGCCGCCGTGATTCTCATCACCGTCACGGTGGTTCTCTCATCGGCGGTGGCTGCAATTTCTTCATCTCCGGTTACACTAACGCTTGAAAGAGCTTTTCCTTCGAATCATGGAGTTGAGTTGAGTCACCTTAAAGCATTGGATAGTTTCAGACATCAACGATTTTTGCAGTCTACTACTACTAACTATGTTGTTAATTTTCCTGTTAAAGGATCCTTTGATACTTCAAAAGCTGGGCTTTACTTTACAAAGGTGAATTTGGGTACTCCTCCAAGAGAATTTTATGTTCAGATTGATACTGGAAGTGATGTTCTTTGGGTTAGTTGTGCTTCCTGCATTGGTTGTCCCCAAACAAGTGGTCTCCAAATTCAGCTCAATTACTTTGACCCTAGGAGTTCTTCGACATCTTCATTCATAGCTTGTTCTGACCAACGGTGCAAGAATGGAGCCCAGTCATCAGATAGCACTTGTTCCGGTCGGAATAACCAATGCACTTATATATTCCAGTATGGAGATGGTAGTGGAACATCGGGCTATTATGTCTCAGACTTGATGCATTTTGCTAGTATTACTCAGGAATCTTTGTTGTCAAATTCCTCGGCGCCTGTGGTTTTTGGTTGTAGCAACCAGCAGAGTGGGGACTTGACAAAGTCTGATAGAGCAATTGATGGTATATTTGGATTTGGGCAACAGGGCATGTCGGTAATTTCACAGCTCGCTTCACAAGGAATAGCACCAAGAGTGTTCTCGCACTGCTTGAAAGGAGATAGTAGCGGTGGCGGCTTATTGGTTCTTGGTGAGATTGTGGAGCCAAACATAATTTATAGTCCACTCGTTCCGTCACAGCCCCATTATAATCTAAATCTTCTGAGCATCTCTGTCAATGGCCAAATTTTGCCAATTGATTCTGCTATTTTTGCTACATCAAACAATAGAGGTACTATTATTGATTCCGGAACAACTTTGGCATACATTGCCGAAGAGGCTTACAGTCCCTTTATCAATGCGATTACAGCTGCTATTCCACAATCTGTGCGCACTGTTCTTTCCAGGGGAAATCAGTGTTACTTAGTTACCGCCAGCCTTGACAGCTTTCCTCAAGTAAGTCTCAATTTTGCTGGTGGTGCTTCTCTCGTTTTAGGACCACAGGACTACCTTATAAAGCAGAATTATATTGGAGATGGATCGGTGTGGTGTATTGGCTTTCAGAAAATCGCAGGTCAAGATGTAACCATTCTAGGAGACCTCGTATTAAAAGACAGAATTTTTGTCTATGATCTTGCTGGCCAACGAATTGGATGGGCTAACTATGACTGTTCGTTGTCGGTTAATGTTTCTGCATCAACCGGTAACGGCAGAAGTGAGTTTGTTAGCGCGGGAGACATAAGTGGAAGCACTTCTTTACGTGATGGATCTCACAAATCGATAAAGAGAAGACTGGTCATTGCTCTATTCATGCACATAACACTGATATGCTATTTTGTATTTTTGTAG 1497 0.4235 MIAAVILITVTVVLSSAVAAISSSPVTLTLERAFPSNHGVELSHLKALDSFRHQRFLQSTTTNYVVNFPVKGSFDTSKAGLYFTKVNLGTPPREFYVQIDTGSDVLWVSCASCIGCPQTSGLQIQLNYFDPRSSSTSSFIACSDQRCKNGAQSSDSTCSGRNNQCTYIFQYGDGSGTSGYYVSDLMHFASITQESLLSNSSAPVVFGCSNQQSGDLTKSDRAIDGIFGFGQQGMSVISQLASQGIAPRVFSHCLKGDSSGGGLLVLGEIVEPNIIYSPLVPSQPHYNLNLLSISVNGQILPIDSAIFATSNNRGTIIDSGTTLAYIAEEAYSPFINAITAAIPQSVRTVLSRGNQCYLVTASLDSFPQVSLNFAGGASLVLGPQDYLIKQNYIGDGSVWCIGFQKIAGQDVTILGDLVLKDRIFVYDLAGQRIGWANYDCSLSVNVSASTGNGRSEFVSAGDISGSTSLRDGSHKSIKRRLVIALFMHITLICYFVFL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1984 498 ProSiteProfiles Peptidase family A1 domain profile. 82 436 IPR033121 -
Mal7g1984 498 PANTHER ASPARTYL PROTEASES 9 457 IPR001461 GO:0004190|GO:0006508
Mal7g1984 498 Pfam Xylanase inhibitor C-terminal 285 436 IPR032799 -
Mal7g1984 498 Gene3D Acid Proteases 55 268 IPR021109 -
Mal7g1984 498 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Mal7g1984 498 PRINTS Pepsin (A1) aspartic protease family signature 315 326 IPR001461 GO:0004190|GO:0006508
Mal7g1984 498 PRINTS Pepsin (A1) aspartic protease family signature 412 427 IPR001461 GO:0004190|GO:0006508
Mal7g1984 498 Pfam Xylanase inhibitor N-terminal 82 267 IPR032861 -
Mal7g1984 498 Gene3D Acid Proteases 269 447 IPR021109 -
Mal7g1984 498 SUPERFAMILY Acid proteases 79 443 IPR021109 -
Mal7g1984 498 CDD pepsin_A_like_plant 82 440 IPR034161 -
Mal7g1984 498 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 9 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1984 Mal-Chr7 71327447 71331765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1984 54 441 Miscellaneous Gene Families AT1G44130 27.273 1.23e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1984 - K00924 gmx:100789004 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1984 7 71327447 71331765 Mal7g1984 7 71327447 71331765 ECH
Mal4g0665 4 7058203 7061770 Mal7g1984 7 71327447 71331765 PCT