Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1963 ATGGATAAGGGTGGTGGGAAACCTAGGGGTCGTCCGAGGAAACGACGAAAGGAGGAGGAGGAGAAGGAAGGGAAATCGGTTAATGAAGCTAAGAGGCAAGCGGTTGAGACGAAACCGATTCCGTTGGTTGGGAGGTATGTGCTGAAAGAGTTTTTGGGAAATGGTGTTTTTCTAGGTAAAGTTGTGTATTATGATAGTGGTTTGTATCGGGTGAATTATGAGGATGGGGATTTTGAGGATTTGGAGAGTGGTGAAATTCGCCCGATACTTGTCAGTGACGATGGCTTTGATGGTGGTTTGGTCAAGAGGAGGAATAAGGTGGATAAAATAGTGTTGCTGAATAGAGCTAAGGTTGCAACTACATCTAAGGGTTCTGTCAAATCTGGGAAAGATGAATCTGCCGTTGGTGTGACTATTCCAAGTGAACTGAACGGTGAAGATGACAAGGATGAAGGTGATGCAGCTGATGCAGATTTGTCGTGTGACTCTGGTTCTGATGTTGAGACAGTGCCTTTGCCACCACCGTTGCAGTTGCCACCATCGTCCGGAACAATAGGTGTGCCAGAGCTGAGTGTCTCCCATCTCTTATCTGTTTATGGATTCTTGAGATCATTCAGCATTCGATTGTATCTTCATCCATTTACTTTGGATGAGTTTGTTGGTTGTCTGAATTGTCGAGTGCCTTGTACTCTGTTTGATGCTATTCATATTTCTCTGATGCGGGTGTTGAGGCGTCATCTTGAAAGCTCGTCATCTGAGGGGTCTGAGCTTGCATCACAATGTGTTAGGTGCAACGATTGGAGCTTACTCGATACGATGACTTGGCCTGTTTATGTGATTCTGTATTTGGTGGTTAATGGGTACACAAAAGGACCCAAATGGAAAGGATTTTATGATGAGGTTTTTAGCAGTGAGTATTATTTGTTGCCTGTAAGTAGGAAGTTAATGATTCTGCAAATTCTTTGTGACGATGTTTTGGAATCTGAGGAGCTAAAAACCGAAATGAACACGCGAAAGGAATCAGAGGTCGGGATGGATGATGATGCAGAAGATATCCTTCCTGCAGAAACTGGCCCCAGAAAAGTCTATCCAAGAAATGCCAGGACCTCTTTTTGTGAGGATAAAGAAGCTGTGAAATTGATTTCAGCATCAAATGCTGTGAACCAACCTGGTAACTCTGTTTCATATTGCAGAGATACAGAAAGCACTGGGGATGGAGATGTTGATAGAAATGGAGATGAATGTCGCCTCTGTAGTATGGATGGAACCCTTCTTTGTTGTGACGGTTGTCCCTCTGCTTATCATTCAAGATGTATTGGTGTGATGAAATCGTCTATACCAGAAGGAAAATGGTATTGTCCAGAGTGCAAAATTGATATGGCTGGGCCCACAATTGCAAAGGGAACCTCACTTAGAGGGGCTGAAATATTTGGGAAGGATTTGTATGGGCAGCTCTTCATGGGTACATGCGATCACTTACTTGTGCTTAACTTTGAGAACAATGAAGTTTGTCTTAGATATTACAATCAGAAGGACATCCCTAAAGTTGTCCAAGTGCTTTATGAATCCATGCTGCATAGGCCAATGTACCATGGTATTTGCATGGCAGTGTTGCGATATTGGAATATTTCAGAAAACTTCTTACCTCTTTGTGCGTCAACTGAAACAAATATAAAGGATGAGATAGAATTTTCTGCCTCTTTGCTTCCTCCTTCAAGTGAAGACAACTATAAACCTGTTAGTGTGGTCAAGGTAGAGAACTCTCCAACCACTGCAAGTTTGGTTCACAATGATAATATGGTGTCTCAAAGTTCTGCTTTTAATAGCAGTGGCATTGCTAGAAATGAAGAGGTTCTTACTGTAAATAAGAAGCTTGCTGAGGAAATTAAAACGGAGGCAATAATTTCAGTTGGTTCTGTTAGTCATCAGTCAGATCTGAACTTTCAAAATCCTGTCAATACATCAACTGCAGTAGATGCTGCTAAGTGCTCTGTGGTAAACAGTCAATTAAGTAATTGTGGCCATGCAAATGATGTGGGGTTGTCTTCGAATTTTTCTTTGCAAAACAAAGAAAACACCCAAGTAGGTTTTGGAAAGTGCGAACGCTCTGCAACTGATGATGTTTGTTACATGGGTTTCTCCTTTAAACCCATGTCATACATAAATTACTATATGCATGGTGAATTTTCTGCCTCAGCAGCAACCCAATATGTTAACGATTCTTCAGAGGAATCTAAGCCAGAGGGTCATGCGTCAGACAGCCAGAAGAAAACAGTATCTGCATACACTTATTTGCAAGCAAAATCATTCTCACAAGTAGCTTCACGTTTCTTTTGGCCAAGTTTGGAAAAGAAGCTTGTGGATGTTCCAAGAGAGAGGTGTGCTTGGTGCTTTTCTTGTAAAGCCAATGTTGTTAGCAAGAGAGGGTGCATGTTAAATCATGCTCTTATAAGTGTGACCAAAAGTGCTATGAAAACCCTTAATCTATTACCTCCTTTAAGGAGTGGAGAGGGAATGCTTCCTAGTACCATTGCAACTTACATTTTATATATGGAGAAATGTTTGCATGGTTTAGTCGTTGGGCCCTTCGTAAATGCAAGCTATAGAGAGAACTGGCGTGAGCAACTTAAACAAGCAACAACATTTAGAGCTATCAAGCCACTTCTACTTAAACTTGAGGAGAACATTCGAAGCATTGCTTTTTGTGGGGACTGGGTTAAGCTGACGGATGATCGGTTTGTTGAATTTCCCAACATACAAAGTGCCACATCTACTCAAGGAACAACTCAGAAACGTGCACCAAGTGGGAGGCGTTATAAAAAGAGGTCATCTATTGATGAAGCTACAGATGATGGTTCTAAGGATAGTATGTGGTGGCGCGGTGGAAGGTTTTCAAGATATATATTTCAGAATACAGCTGTAACAAAATCCATGGTCCGAAAAGCAGCTCGCCAAGGTGGTTCGAGGAAAATTTCTGGTATTTTCTATGCTGATGACTCTGAAATTCCCAAAAGAAGTAGACAGCTTGTCTGGAGAGTCGCAGTTGAAATGAGTAGGAATGCCTCACAGTTGGCACTCCAGGTCAGATATCTAGATTTTTATCTTAGATGGAGTGATCTGATTCGTCCAGAGCAGAACATACAGGATGGGAAAGGTCAAGAGACTGAAGCTTCTGCTTTCCGAAATGCAAAAATTTGTGACAAAAAACTTGTACAAGGAAAAATTTGTTACGGAATAGTTTTTGGGAGCCAAAAGCATCTTCCTATTCGGGTGATGAAAAGTGCTGTTGAAACAGAGCAAGGGCCGGAAGGAAGAGAAAAGTATTGGTTTTTTGAAACTCGCATTCCTTTATATTTGGTAAAAGAGTATGAAGAAGGTAATGGAAAGGCTCCATGTGAAGAACACTATAGTGGAACATATCAGTTGCAGAGAAGGCAGTTGAAATGTACATGCAATGACATATTCTTTTACCTCGTTTGCAAGAGAGACAACTTGACATACTTGTGTTCTTCATGTCAGATGGGCATTTCAATTCGGTATGCTCACAAGTGCAATGCATGTCAAGGTTATTGTCACAAGAACTGTTCCATAAGTTCAGTCTCTAGACTCTCTACAAATGGGGGAGTTGAGTGCTTGACCACATGCAAACAATGTCACCATGCCCAGTTACTTGCTCCAAACGTAACTAGTGATGAATCTCCAACAAGTCCCTTAATCTTACAAGGACAGGAAAACAGCTCTGGGACTATTTTTAAGGGAGCAAGACCAAAGACCAGTCATTCTGATATGAAACAAGTAAATTCCAAGTCAGTTTCAAAAGGATCAAAGCGTAAATGTAAGAATCAAACTTCGACTTCTACCAGGAAAAAAAATGGTCATCCCGACACGAAACTAGCTGAGTCTGATTCCACTTCGGCACCAAGCAGCCGTCGCAACAATAATAACTGTTCTTGGGGTATCATATGGAAAAAGAAAATTAATGAAGATAACATTGATTTTAGGATAAAAAACATACTTTTAAAGGGAGCGTCAGACATACCTGATCCGGGACCTGCGTGTCACTTATGTGGAAAGGCATATAGGTCAGATCTAATGTATATTTGCTGCGAGACATGCCAGAATTGGTTTCATGCTGAAGCTGTTGAACTTGAAGAATCCCAAATTTCGACCGTGTTGGGCTTCAAATGTTGCAAGTGTCGCAGGATAAAATCACCCGTGTGTCATTACTCTGATTCAAAACCTGTCTCAGAAGTTAAGAAAACACGCAAAAGGGCTGTAAAGAAAGAACAGTCTGGAGCCAATTCTGATTCTGGAACATTTAATGATATGAGAGAGTGGGAATCTGCTACTCCTGTCTTTCCTGCGGGGAATGATCCTTATTCTGATTCTGGAACATTTAATGATATGAGAGAATATGAACCTGCTACTCCTGTCTTTCCTGTGGGGGATGATCATTTACCTTTCTCTCTTGAAAATGTTGAGCTGATTACAGGACCTAAATTAGAGTCGGATGTCGAGTGGAACACTGTCTCTGTGCCAGGGCCTCGGAAATTACCAGTCAGAAGGAATGTTAAGCAGGAGGGAGATGATGATGGTTCTGTTGCAGGAATTCCTTTTCAAGCTGAATTTCCAACATACAGTGAAGCAGGTTATCTGTCCAATCCAGCAGATTCGATATTACCTTTAGAATACAACCCTGCTGTTTTTGACAGCAATCTGCTGAATGATTTTGAAGACAATAACAATACAATCTTCGATCCAAATGAACTTCTGCGCTCAGATGATGATGGCCAGATTGATGGAGGTGATTTGTCCGGGGAATTGTTGGAATATAATTTTGATAATTTTGCTACCACTGTTCCTGAAGAATTTGGAGATGGCAGTTTTAGTTGTTGTGTATGTTCACAAAATGAACCAGGCCCTGATCTTTTTTGTGACACTTGCGGGACTTTGATGCACAGCCATTGTTTGCCTTCTTGGCATGAACCAGTTTCTGAACCGGAACATTGGAGGTGTCTGACTTGCCGGGATTGGCAATAA 5040 0.4141 MDKGGGKPRGRPRKRRKEEEEKEGKSVNEAKRQAVETKPIPLVGRYVLKEFLGNGVFLGKVVYYDSGLYRVNYEDGDFEDLESGEIRPILVSDDGFDGGLVKRRNKVDKIVLLNRAKVATTSKGSVKSGKDESAVGVTIPSELNGEDDKDEGDAADADLSCDSGSDVETVPLPPPLQLPPSSGTIGVPELSVSHLLSVYGFLRSFSIRLYLHPFTLDEFVGCLNCRVPCTLFDAIHISLMRVLRRHLESSSSEGSELASQCVRCNDWSLLDTMTWPVYVILYLVVNGYTKGPKWKGFYDEVFSSEYYLLPVSRKLMILQILCDDVLESEELKTEMNTRKESEVGMDDDAEDILPAETGPRKVYPRNARTSFCEDKEAVKLISASNAVNQPGNSVSYCRDTESTGDGDVDRNGDECRLCSMDGTLLCCDGCPSAYHSRCIGVMKSSIPEGKWYCPECKIDMAGPTIAKGTSLRGAEIFGKDLYGQLFMGTCDHLLVLNFENNEVCLRYYNQKDIPKVVQVLYESMLHRPMYHGICMAVLRYWNISENFLPLCASTETNIKDEIEFSASLLPPSSEDNYKPVSVVKVENSPTTASLVHNDNMVSQSSAFNSSGIARNEEVLTVNKKLAEEIKTEAIISVGSVSHQSDLNFQNPVNTSTAVDAAKCSVVNSQLSNCGHANDVGLSSNFSLQNKENTQVGFGKCERSATDDVCYMGFSFKPMSYINYYMHGEFSASAATQYVNDSSEESKPEGHASDSQKKTVSAYTYLQAKSFSQVASRFFWPSLEKKLVDVPRERCAWCFSCKANVVSKRGCMLNHALISVTKSAMKTLNLLPPLRSGEGMLPSTIATYILYMEKCLHGLVVGPFVNASYRENWREQLKQATTFRAIKPLLLKLEENIRSIAFCGDWVKLTDDRFVEFPNIQSATSTQGTTQKRAPSGRRYKKRSSIDEATDDGSKDSMWWRGGRFSRYIFQNTAVTKSMVRKAARQGGSRKISGIFYADDSEIPKRSRQLVWRVAVEMSRNASQLALQVRYLDFYLRWSDLIRPEQNIQDGKGQETEASAFRNAKICDKKLVQGKICYGIVFGSQKHLPIRVMKSAVETEQGPEGREKYWFFETRIPLYLVKEYEEGNGKAPCEEHYSGTYQLQRRQLKCTCNDIFFYLVCKRDNLTYLCSSCQMGISIRYAHKCNACQGYCHKNCSISSVSRLSTNGGVECLTTCKQCHHAQLLAPNVTSDESPTSPLILQGQENSSGTIFKGARPKTSHSDMKQVNSKSVSKGSKRKCKNQTSTSTRKKNGHPDTKLAESDSTSAPSSRRNNNNCSWGIIWKKKINEDNIDFRIKNILLKGASDIPDPGPACHLCGKAYRSDLMYICCETCQNWFHAEAVELEESQISTVLGFKCCKCRRIKSPVCHYSDSKPVSEVKKTRKRAVKKEQSGANSDSGTFNDMREWESATPVFPAGNDPYSDSGTFNDMREYEPATPVFPVGDDHLPFSLENVELITGPKLESDVEWNTVSVPGPRKLPVRRNVKQEGDDDGSVAGIPFQAEFPTYSEAGYLSNPADSILPLEYNPAVFDSNLLNDFEDNNNTIFDPNELLRSDDDGQIDGGDLSGELLEYNFDNFATTVPEEFGDGSFSCCVCSQNEPGPDLFCDTCGTLMHSHCLPSWHEPVSEPEHWRCLTCRDWQ* 1680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1963 1679 SUPERFAMILY FYVE/PHD zinc finger 387 458 IPR011011 -
Mal7g1963 1679 MobiDBLite consensus disorder prediction 1248 1312 - -
Mal7g1963 1679 PANTHER PHD FINGER FAMILY PROTEIN 2 1673 - -
Mal7g1963 1679 MobiDBLite consensus disorder prediction 137 164 - -
Mal7g1963 1679 MobiDBLite consensus disorder prediction 939 953 - -
Mal7g1963 1679 SUPERFAMILY FYVE/PHD zinc finger 1345 1406 IPR011011 -
Mal7g1963 1679 MobiDBLite consensus disorder prediction 1298 1312 - -
Mal7g1963 1679 ProSiteProfiles Zinc finger PHD-type profile. 1628 1678 IPR019787 -
Mal7g1963 1679 SMART testlast3 189 249 IPR018501 -
Mal7g1963 1679 MobiDBLite consensus disorder prediction 1 32 - -
Mal7g1963 1679 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 304 336 IPR028942 -
Mal7g1963 1679 Pfam PHD-finger 415 457 IPR019787 -
Mal7g1963 1679 MobiDBLite consensus disorder prediction 923 953 - -
Mal7g1963 1679 ProSiteProfiles DDT domain profile. 189 249 IPR018501 -
Mal7g1963 1679 SUPERFAMILY FYVE/PHD zinc finger 1626 1677 IPR011011 -
Mal7g1963 1679 CDD PHD2_CHD_II 415 456 - -
Mal7g1963 1679 SMART PHD_3 414 457 IPR001965 -
Mal7g1963 1679 SMART PHD_3 1352 1400 IPR001965 -
Mal7g1963 1679 SMART PHD_3 1630 1676 IPR001965 -
Mal7g1963 1679 MobiDBLite consensus disorder prediction 1248 1270 - -
Mal7g1963 1679 PANTHER DNA-BINDING AND ZINC-FINGER PROTEIN 2 1673 - -
Mal7g1963 1679 Pfam DDT domain 191 246 IPR018501 -
Mal7g1963 1679 ProSitePatterns Zinc finger PHD-type signature. 415 456 IPR019786 -
Mal7g1963 1679 MobiDBLite consensus disorder prediction 1422 1441 - -
Mal7g1963 1679 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 406 461 IPR013083 -
Mal7g1963 1679 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1348 1407 IPR013083 -
Mal7g1963 1679 ProSiteProfiles Zinc finger PHD-type profile. 412 459 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1963 Mal-Chr7 70355710 70453029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1963 279 558 EF-hand Containing Proteins AT5G22760 46.316 6.00e-72 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mal7g1963 DDT 1.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1963 - - mtr:MTR_4g055920 2382.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1963 7 70355710 70453029 Mal7g1963 7 70355710 70453029 ECH