Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1960 ATGATCAAAATCACTAGGATTATTCTTGTGGTGAAGGGTTTGAGTAGTTTGCATGATGTCCTAGGTGGATGTGTTGCAGAAACAGCTGGAGGAAGCATGACACCTCATGTACTAATTGTTAACCCTGGAGAGGATGTGGTTGGAAAAATATTTTCATTTTTTCAGAAAGGTCCTCGAGCAGCTGTTTGCATACTTTCTGCTACTGGCACGGTATCAAGTGTCACCCTTCGTCAACATGGTGTTTCTGATGATTTTTTAAGATACGAGGGTCGCTTTGATATTTTATCTTTAAGTGGATCATGCACCTTCACTAGTGGTGCACAAAGGAAAGTTGGCATGTTGAGTGTTTCATTGGCTAAACCTAATGGGGAGGTTTTTGGAGGTGGTGTTGAGAACACATTGATAGCTGCTACTCCTATTCAGGTTATCCTTTGA 435 0.4138 MIKITRIILVVKGLSSLHDVLGGCVAETAGGSMTPHVLIVNPGEDVVGKIFSFFQKGPRAAVCILSATGTVSSVTLRQHGVSDDFLRYEGRFDILSLSGSCTFTSGAQRKVGMLSVSLAKPNGEVFGGGVENTLIAATPIQVIL* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1960 144 Gene3D - 35 144 - -
Mal7g1960 144 PANTHER DUF296 DOMAIN PROTEIN 19 144 - -
Mal7g1960 144 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 19 144 IPR039605 GO:0003680
Mal7g1960 144 Pfam Plants and Prokaryotes Conserved (PCC) domain 35 144 IPR005175 -
Mal7g1960 144 ProSiteProfiles PPC domain profile profile. 30 144 IPR005175 -
Mal7g1960 144 SUPERFAMILY AF0104/ALDC/Ptd012-like 31 144 - -
Mal7g1960 144 CDD DUF296 34 144 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1960 Mal-Chr7 70275299 70277388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1960 21 144 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 52.381 3.32e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1960 - - mtr:MTR_4g055813 209.92