Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1959 ATGGATCAAAACGTGAACCTAGAACTTACTCTATCACTGGGTTCAACCCACAACAGTTCAAAAACAACCAACAATGCCATCACTGAGAGAGAAAATGTTCGAGTTGATGCTAGTTTGGACATCGGAGCTAAGTCTAGACCTGGAGGTTCAGAATCCACTCTGGTGAAAATGGGGAGAGGGAGGCCTCGAAAATACGAGGTTGGAGGGAACCCATTGCCTCCTGCCACGTTGCCACCAATGATTTCCATTCAACCTGATGGAAATGAGGAGAATCTTGGAACCGATCATCCACGTGATTCTGGAAAACTGCCGATTTTGGCTTCCAGTGAAAGAGCTGGAGGAAGCGTGACGCCTCATGTACTAATTGTTAACCCTGGAGAGGAGCTGGTTGGAAAGATATTTGCATTTTTGGAGAAAATTTCTCAAGCAGATGTGTGCATAATTTCTGCTACTGGAACAGTATCAAGTGTCCTCCTTCACCAACCTGATGTTTCTGGTGGTTTTTACAGAGATGAGGGTCCCTTTGATATTTTATATTTGAATGGCCAATGCTTCTTCGCCAATGCTGCTACTGGTGAACAAAGAAAAATTAGCATGCTGACTGTTTTTTTGGCTGAACCTGATGGGAGGGTTTTTGGAGGTTGTGTTAACAACTTATTGATAGCTGCTACTCCTATTAAGGTATGA 687 0.4367 MDQNVNLELTLSLGSTHNSSKTTNNAITERENVRVDASLDIGAKSRPGGSESTLVKMGRGRPRKYEVGGNPLPPATLPPMISIQPDGNEENLGTDHPRDSGKLPILASSERAGGSVTPHVLIVNPGEELVGKIFAFLEKISQADVCIISATGTVSSVLLHQPDVSGGFYRDEGPFDILYLNGQCFFANAATGEQRKISMLTVFLAEPDGRVFGGCVNNLLIAATPIKV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1959 228 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 228 - -
Mal7g1959 228 ProSiteProfiles PPC domain profile profile. 113 228 IPR005175 -
Mal7g1959 228 MobiDBLite consensus disorder prediction 41 98 - -
Mal7g1959 228 PANTHER DUF296 DOMAIN PROTEIN 12 227 - -
Mal7g1959 228 Pfam Plants and Prokaryotes Conserved (PCC) domain 118 228 IPR005175 -
Mal7g1959 228 CDD DUF296 117 224 IPR005175 -
Mal7g1959 228 Gene3D - 118 228 - -
Mal7g1959 228 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 12 227 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1959 Mal-Chr7 70230170 70235270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1959 54 228 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 36.058 1.88e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1959 - - mtr:MTR_4g055705 249.21