Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal7g1938 | ATGAGATTGGAGAAGTGTTGGTTCTGTTCTTCTACTGTTTACCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCTAAGATTTTTCGATTTTGCAGATCTAAGTGCCACAAGAACTTCAAAATGAAGAGAAACCCTAGGAAAGTAAAATGGACCAAGGCATATAGGCGAGTGCATGGAAAGGATATGACACAGGATTCAACCTTTGAGTTTGAGAGGAAGCGCAACAGACCTGAGAGATACGACAGGAATCTTGTTGAGGATGTCCTCAAGGCCATTCCAACGATTGTTAAGATCAGAGCCAGCAGAGATGAAACACACCACAAGAATAGGATGAAGGGCAAGAAGCAGAAGGTGCAGAAGGAAGCTGCCAAGGAGTATGAGCAGAGCATCCATCTACTTAAAGCTCCTTCTGCTGTGTCTGAAAAGGAGAAGATCAAAGTGGCGGTTTCCCAACAACAACCAGAGGAGAATCGTATCATGGAAGAGTGA | 492 | 0.439 | MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLVEDVLKAIPTIVKIRASRDETHHKNRMKGKKQKVQKEAAKEYEQSIHLLKAPSAVSEKEKIKVAVSQQQPEENRIMEE* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal7g1938 | 163 | PANTHER | BNAA04G10330D PROTEIN | 1 | 163 | - | - | |
| Mal7g1938 | 163 | CDD | Ribosomal_L24e_L24 | 1 | 54 | IPR000988 | - | |
| Mal7g1938 | 163 | PANTHER | 60S RIBOSOMAL PROTEIN L24 | 1 | 163 | IPR000988 | - | |
| Mal7g1938 | 163 | MobiDBLite | consensus disorder prediction | 100 | 163 | - | - | |
| Mal7g1938 | 163 | SMART | 4TRASH | 6 | 44 | IPR011017 | - | |
| Mal7g1938 | 163 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 4 | 56 | - | - | |
| Mal7g1938 | 163 | Gene3D | Ribosomal protein L24e | 1 | 68 | IPR038630 | - | |
| Mal7g1938 | 163 | ProSitePatterns | Ribosomal protein L24e signature. | 8 | 25 | IPR023442 | - | |
| Mal7g1938 | 163 | Pfam | Ribosomal protein L24e | 1 | 65 | IPR000988 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal7g1938 | Mal-Chr7 | 69554958 | 69557396 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal7g1938 | 1 | 163 | Cytoplasmic Ribosomal Protein Gene Family | AT2G44860 | 68.098 | 3.19e-81 | 235 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal7g1938 | K02896 | - | gmx:100306000 | 259.225 |
Event-related genes