Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1932 ATGGCCGCCGCAGCTCGTCCGCTCGTGACTGTCTACACCGTCGAAGCCACCGACACCCCTGAAACCATCTCCATCCCTGATGTCATGCGTGCACCCATCCGCCCTGACATCGTCAACTTCGTCCACACCAACATCTCCAAAAACTCCCGCCAACCCTACGCCGTCAGTCGCAAAGCCGGCCACCAAACCTCCGCCGTATCCTGGGGTACCGGTCGTGCTGTCTCCCGTATCCCTCGTGTCGCCGGTGGCGGTACCCACCGTGCCGGTCAAGCTGCTTTTGGTAATATGTGCCGTGGTGGACGCATGTTCGCTCCTACCCGGATCTGGCGTAAATGGCACCGCAAAATCAATCTGAACCAGAAGCGCTACGCTGTTGTCTCCGCTATTGCTGCTTCTGCAATCCCTTCACTCGTCCTTGCTCGTGGTCACCTGATTGAATCTGTGCCGGAGATTCCTCTCGTTGTTGGTGATTATGCTGAATGTGTTGAGAAGACCAAGGATGCGATCAAGATTTTGAAATCAGTTGGAGCTTACCCCGATGCCGAGAAGGCGAAAGACAGCCTTGCGATCCGTTCTGGAAAAGGTAAAATGCGTAACCGTAAGTATATCTCTCGTAAGGGTCCATTGATTGTTTATGGAACCGAAGGAGCCAAGGCCGTGAAGGCTTTTCGGAACATTCCTGGTGTTGAGATCACCAATGTGGAAAGGTTGAATCTTTTGAAGCTTGCACCTGGTGGGCATTTAGGGAGATTTGTGATTTGGACTAAATCGGCTTTTGAGAAATTGGATTCGATTTATGATAAGGCTTCTGAGAAGAAAGGTTATGTGCTTCCTAGGGCTAAGATGGTGAATTCTGATGTGACTAGGATTATTAATTCTGATGAGGTTCAGAGTGTTGTTAGGCCTGTGAAGAAGGAGGTGAAGAGGGCTACCTTGAAGAAGAATCCTTTGAAGAATTTGAATGTTATGCACAAGCTTAATCCTTATTATAAGACTGCTAAGAGGATGGTTTTGCTTGCTGAAGATGAGAGGGTTGAACTTGAGGCTGCTAAGAAGAGGTTTGCTAGGAAGACTGTTGCGTCCATCTCTGGAGAAGGATACGACCAAATCTCTGGTTTTAAGTATAAGATCCATTTTGATGAAAGTTCCTCGTGGATGATGACGAGCATTTGCCCAAATTGGCCTCGACGTTCGCGTACCTTCAAGAAATCTGTATCACCTTACCTTCGTGCAATGTGTCCTGTCAAAACACCCATTGAGAAATTAGAAGAAGAGCTGAAGTTTAAGGAGATAATTTTGAATTCTGTTCAAAAGAGAATTGCAAACCTTAATGATTGTACTGCGAAGTCCATTTTTGAGGATCAGGAAAGACGGCTGAAGTGCGAATTGTACATACTGGTTGATGAGTTGAAGGAGATGAAGGATCGGGAAAGACGACGGCTGAAGTGCGAATTGGTCAAACTGGATGAGTTGAAGGAGATGAAGGAGGATTGGGGAAGACAACAGCTGGAGTGCGAATTGGACAAAACTGGTTGA 1536 0.4746 MAAAARPLVTVYTVEATDTPETISIPDVMRAPIRPDIVNFVHTNISKNSRQPYAVSRKAGHQTSAVSWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINLNQKRYAVVSAIAASAIPSLVLARGHLIESVPEIPLVVGDYAECVEKTKDAIKILKSVGAYPDAEKAKDSLAIRSGKGKMRNRKYISRKGPLIVYGTEGAKAVKAFRNIPGVEITNVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYDKASEKKGYVLPRAKMVNSDVTRIINSDEVQSVVRPVKKEVKRATLKKNPLKNLNVMHKLNPYYKTAKRMVLLAEDERVELEAAKKRFARKTVASISGEGYDQISGFKYKIHFDESSSWMMTSICPNWPRRSRTFKKSVSPYLRAMCPVKTPIEKLEEELKFKEIILNSVQKRIANLNDCTAKSIFEDQERRLKCELYILVDELKEMKDRERRRLKCELVKLDELKEMKEDWGRQQLECELDKTG* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1932 511 Coils Coil 419 439 - -
Mal7g1932 511 Pfam Ribosomal protein L4/L1 family 25 263 IPR002136 GO:0003735|GO:0005840|GO:0006412
Mal7g1932 511 SUPERFAMILY Ribosomal protein L4 8 264 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mal7g1932 511 Coils Coil 474 494 - -
Mal7g1932 511 PANTHER BNAC03G35890D PROTEIN 2 360 - -
Mal7g1932 511 ProSitePatterns Ribosomal protein L1e signature. 117 143 IPR013000 -
Mal7g1932 511 Coils Coil 330 350 - -
Mal7g1932 511 Pfam 60S ribosomal protein L4 C-terminal domain 273 344 IPR025755 -
Mal7g1932 511 Gene3D - 3 301 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mal7g1932 511 PANTHER 60S RIBOSOMAL PROTEIN L4 2 360 IPR045240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1932 Mal-Chr7 69389617 69395535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1932 2 389 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 70.968 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1932 K02930 - gmx:100779764 579.711