Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1928 ATGGCGACGGAGAACACAACAACCGTAAACCCTAGCCATTCACAACGACCAAAAGTGGTAGTGATAACCGGCCCAACCGGTTCCGGCAAATCAAAACTAGCCGTCGATTTGGCCTCACACTTCCCCATCGAAGTAATCAACGCCGATTCCATGCAAGTCTACCGTGGCCTCGATATTCTCACCAACAAAATCCCCTTCTCTGAACAAAACGGTGTGGTGCATCATCTATTGGGCAGTGTAAATCCGAATTTGGAATTCACTGCTAAAACTTTTCGTGATTCTGCTATTCCCATTATTGATGCAATATTGTCTCGTAATCACTTACCTGTTATTGTCGGTGGTACTAATTACTATATACAGGCTCTTGTGAGTCAGTTTCTTCTAGATGATTCAACAAATGATTTGGATGAAAGCTATTTGGGTGACTCACCTGGTATCGCCGGGTATGATAATAATTTTGATGCTGAAAATGACAGTTCAAGCAACAATTATGATTTGCTTAAAGATATTGATCCAGTTGCAGCAAATAGAATCCATCCAAATAACCATAGAAAGATAAATCAATACATTAGTTTGTACTCTCGAACTGGTGTTCTTCCCAGCAAAGTTTTTCAAGGACAGGCAGCAGAGGGCAGAATTGGGGTCAAGCTGATAACTTAA 660 0.4136 MATENTTTVNPSHSQRPKVVVITGPTGSGKSKLAVDLASHFPIEVINADSMQVYRGLDILTNKIPFSEQNGVVHHLLGSVNPNLEFTAKTFRDSAIPIIDAILSRNHLPVIVGGTNYYIQALVSQFLLDDSTNDLDESYLGDSPGIAGYDNNFDAENDSSSNNYDLLKDIDPVAANRIHPNNHRKINQYISLYSRTGVLPSKVFQGQAAEGRIGVKLIT* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1928 219 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 15 203 - -
Mal7g1928 219 Gene3D - 12 142 IPR027417 -
Mal7g1928 219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 126 IPR027417 -
Mal7g1928 219 Pfam IPP transferase 52 207 - -
Mal7g1928 219 Gene3D - 150 208 - -
Mal7g1928 219 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 15 203 IPR039657 -
Mal7g1928 219 TIGRFAM miaA: tRNA dimethylallyltransferase 19 210 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1928 Mal-Chr7 69228337 69231459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1928 22 210 C2H2 Transcription Factor Family AT2G27760 61.780 7.56e-84 254