Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1923 ATGAACCGCGACGGCCGAAAATGGGACCGGAGAGACAACAACAACAAGGTCTCCAAGAAGCAGAAACTCATCAACAACGCCGAAGAAGAACTCGAAGCAAAGCTAGGGTTTGATCTCTTCTCGGAAGGGGAAAAGCGTCTTGGATGGTTACTCACTTTTTCGTCGTCATCTTATGAGGACGAGGATACCAGCAAAGTCTACAGTTGCGTTGATCTTTACTTTGTCAAACAGGATGGGTCCTCATTCAAGACAAAATACAGATTTCGCCCTTATTTCTATGTAGCTACGAAGAATAAAATGGAGATGGATGTTGATGCGTACCTGAGACGACGTTATGAAAGCCAAATTGCAGATATTAACATTTTAGAAAAGGAAGACCTGGATCTTAAAAACCATTTGTCTGGATTGAGAAAATCTTATTTAAAGCTTTCGTTTGATACCGTGCAACAACTGATGAATGTGAAGAGTGACCTGATGCACGTTGTTGAAAGAAATAAGGCGAAGTCTGATGCTGCAGAAGCCTATGAGTCCATATTAACTGGGAGAAGAGAACAAAAGCTTCAAGATTTTCTAGATTGCATAATTGATCTTCGTGAATATGATGTTCCTTACCATGTTCGCTTTGCTATTGACAACGATATACGGTGTGGCCAGTGGTATGATGTTGGCGTGTCCAATGATGGGGTTACACTTGAGAGGAGGACAGATCTTCTGCAGCGCGCTGAAGTTCGTGTCTGTGCATTTGATATCGAGACCACAAAACTTCCATTGAAGTTTCCTGATGCTGACTATGATTCAATTATGATGATTTCATATATGGTAGATAGGCAAGGGTATTTAATCACAAATAGAGAGTGTGTTGGAGATGATATAGAGGATTTAGAGTTTACTCCAAAACCAGAGTTTGAAGGGTGTTTTAAGGTGACAAATGTTCAAAACGAGATTGAGCTCCTTAGATTGTGGTTTTCTCATATGCAAGAGGTGAAACCTGGTATCTATGTGACATATAATGGTGATTTCTTTGATTGGCCATTCCTGGAACGACGGGCAGCCTATCATGGGTTCAAAATGAGTGACGAACTGGGGTTTCAATGTGACATGAATCAAGGTGAATGCCGTGCTAAATTTGCTCCCCATTTAGATTGTTTTGCATGGGTTAAACGTGACAGTTATCTTCCTCAGGGGAGCCAAGGCCTCAAGGCTGTAACAAAAGCAAAGTTGGGTTATGATCCAAAAGAGGTGAACCCTGAGGACATGGTACGCTTTGCAAAGGAAAAGCCGCAGATGATGGCCTCCTATTCTGTTTCTGATGCAGTGTCAACATATTACTTATATATAACTTATGTTCATCCTTTTATTTTCTCTCTTGCCACTATTATACCCATGTCACCAGATGAGGTTCTGCGCAAAGGCAGTGGGACCCTGTGTGAAATGTTGCTTATGGTCCAGTCATACAAGGCTAATGTTGTCTGCCCTAACAAGCACCAATCTGACCCGGAGAAGTTTTATAAGAATCATCTTCTTGAGAGTGAGACGTACATAGGTGGCCACGTTGAATGCCTAGAAAGTGGTGTATTTAGATCTGATATTCCATGCAGTTTTACACTCGAGCCATCTGCCTTTGAGCAATTGATCAACAACCTTGATCGAGATCTACAATATGCTATAAGAGTAGAGGGTAAGATGGATTTGGAATCTGTCTCAAATTATGATGAAGTGAAGAATGCTATCATGGAAAAGCTTGTAAACTTACGAGATGCGCCGATACGTGATGAGTGCCCCCTCATTTATCATTTGGATGTAGCTGCAATGTATCCAAATATAATATTAACAAATCGACTTCAGCCTCCATCAATTGTTACAGATGAGATTTGTACTGCATGTGACTTTAACCGTCCCGGAAAGACTTGTCTACGCAAGCTTGAGTGGGTTTGGCGTGGAGCAACATTTGCGGCAAAGAAAAGTGACTATTATCATCTAAAGAAGCAAATTGAGTCAGAGTTTGTAGATGGGGTAAATGAAAGGTCATCAAAATCTTTTCTTGACCTGCCCAAGGCCGAGCAACAATTAAGACTAAAAGAGCGTTTAAAGAAATACTGCCAAAAGGCATATAAACGGGTACTTGACAAACCAGTTACCGAACTCCGAGAAGCAGGAATCTGCATGCGCGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTTCGGGATAGGAGATATGAATATAAAGGTCTTAACAAGGTTTGGAAGGGAAAACTTTCAGAAGCCAAGGCCAGTGGAAATTCTATAAAAATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCTCATAAGTGTATTCTTAATTCCTTTTATGGATACGTAATGCGCAAGGGTGCTAGATGGTACTCTATGGAAATGGCTGGTGTTGTCACATACACTGGTGCAAAAATAATTCAGAATGCTCGCTTGCTGGTAGAGAAAATAGGAAAACCACTTGAACTAGACACAGATGGTATCTGGTGTGCACTTCCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAGTAGACTCCAAACGGAAGCTGACAATCTCATACCCTTGTGTTATGCTTAATGTTGATGTGGCAATAAATAATACAAATGATCAGTACCAGACACTCACGGATCCAATTAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATACAAGGCAATGATAATTCCTGCTTCCAAGGAGGAAGGGATTTTAATTAAGAAGAGATATGCTGTTTTTAATGATGACGGATCCCTCGCAGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATCAAAGTTTTCCAGGCTGATCTTTTTGAAAAGTTTCTGCATGGATCAACCTTAAAGGAATGCTATTCAGAAGTTGCTAAAGAGGCAAACCGCTGGCTTGATCTTCTTGATAACCAAGGAAAAGATATTGCAGATAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGATTATGGTCAGCAGAAGTCTTGTGCTGTTACAACTGCTAAACGTCTTGCTGACTTTCTTGGTGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAGTAGCAAGTGAGCCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTGAAACTGATGCTGAAGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCATCAGATGTTGGCATTCGCTCTATAATTGACTGGTCCTATTACAAGCAGCGGCTTAGTTCTTCAATTCAAAAAATCATCACTATTCCTGCTGCAATGCAAAAGGTTGCAAATCCTGTCCCCAGGGTTGTTCATCCTGATTGGTTGCATAAAAAGGTCCGCGAGAAGGAGGACAAGTTTCGCCAAAGAAAAATAGATGATACCTTTAAGTCAGTGAACAAGAATGAGCGCTTAAAAAAGCCTAATGATTCTAGTGGTATCGACCTTGTTATGGTTGATGAGACTGTTAATGACATGGAGGACTTTGGAAACAGGAGCAGGAGTTCTGCATTTGGACCTAGACCAATTATACGGCATTATGAAGCTAATAATGAACAGCATTCAGAGAAGTTCAATGGTCAAGAAGATTCAGAGCGACAACATATTGACAGTAGCAATATAGATCAATCCCTTTCACTGTCACAACAAAATGAAACATTAAGTGAAAATGTTGATAGAACTGTCGATTATCAAGGATGGCTTCAAATAAAAAAGAGAAAGTGGAAAAATATGCTGGGAAAGAGAAAGAAGCGAAGATTGGAGAATTCAAAGAGATCTGACCATTTAAATGGCAGTCTTGAACAAACCAACAGTAAGATGAATCATGGCAGAAGTAATGTCAGTTCATATTTTAGAAGGCATGAGGTAGTCCTAACACGGTGCCACTGGCAGATAATACAGCTAGTCCACGGTCCACAAGTTGGCCAATTTTTCGCTTGGGTTGTTGTTGATGGGCTTATGCTCAAGATTCCTATCTCTATTCCTAGAGTCTTTTACCTTAACTCTAGATCACCAACTGAAGAGTTTTCGGGCAAACATGTTAACAAGACTCTTCCTCATGGAAGACATAGTTATAACCTTTACGAGGTCACAATTAATGAAGTACAATATCAAGAAGAAAGCAAAAAACTTGCCGCTCTTCTAGCAGATCCTGATGTTGAGGGAGTATATGAAACCAAGGTGCCACTGGAGTTCAACGCTATAGTCCAGCTTGGTTGTGTTTGTAAGGTGGATAAAGCTGCTAAAAAACGTAGCCTACAAGAGCCATGGAATTTGAATGAATTGCACATGAAGACCACAACAGAATGCGCTTATCTTGAACAATCAATATCTTTTTTTTACTTATACCATAGCATCTTAGAGGGACGGGCTATATATGTTGGATATTTTCCTGGGTCACAAGCAATAACTTTTGTGGTTGTTAATCCCTACCAAAACCAGGACTTATCACCAGCTTTTCTTGACAGACAATTTCGCGATGCCTGCAGTGCTTTGTCTATTGAGCCACCTCCGAGGAATGGCATAAATTTTAAAGTGGAATATGTTGCACTTGTCAAGGATGCTGAAACAAGAATGCAAAGCGCAATAAATGATCACAGGAGTGAACATGGGCCTATGGTCGCTGTCATTGAATGCCCAGATGTTCAACTATTAAAACTGGGCATTCACGCTCTTGATGATTTTCCATGCCTGAGTATTCCTTCTAATGCACGTGATAGTCAGTATCCGATTCTTGGATGGCAACAAGTTGCTGCTAAACTTGGAATGCAACGTTGTGCAGCTTCAGTCCAGTGGCTAAATGAGAGAATTGCTCTATCAAGATATGCCCACGTACCACTGGGGAACTTTGAATTTGACTGGCTTATGTTTACAGTGGATACCTTCTTTTCTAGAGCATTGCGTGATAATCAACAGGTGCTTTGGATATCTGATGATGGTTTTCCAGATTTGGGTGGCAACAATGGTGAAGAGAACTGTTTTTTAGATGAGGTACACCAACCTGTTTGTACGTTTCCTGGAGCTTATAGAAAAATTAGCGTGGAGCTAAAGATACACCACCTGGCTGTAGATGCCCTTTTAAAATGCAACCAAGTTAATGAAATGGAAGGAGGTGCTTTGTTAGGATTTGGTCATGAATTTGATTCTGAAGCATTTACTGGGAATGGTCAGAATGGCTTTGATGAGTCTACTTCATGCGCACATGCCTTTCGAGTCCTAAAACATTTGATCCAGCGGTGCCTTGCAGATGCAGTCACATCTGGAAATGTTTTTGCTGATGCTGTATTGCAACATCTGTATAGATGGCTTTGCAGCCCTCACTCAAAATTTCATGATCCTGCTCTTCACCAGCTACTCCACAAGGTCATGCAAAAGGTCTTCGCATTGTTGTTGGCAGAGTTCCGCAAGTTGGGTGCAACAATTGTATTTGCAAACTTCTCAAAGATTATTATAGACACGGGCAAATATGATTTGTCTACGGCCAAAGCATACTGTGATAGTTTGTTAAGAACTATACAATCTAGAGACCTATTCGAGTGGGTTGAGCTTGAACCACTGCAGTTTTGGTGCTCATTGCTGTTCATGGACCAGTATAACTACGGTGGAATACCAGCAAAATCTGATGAAGCCATGAATGATGAGTCTCAAGTTGACATAATATCAAGTTGGAATATTGCAGAATATTTGCCGAAAAAAATCCAAGACCATTATGTTTACATAGTTTCTGAATTCATTCATATTCCTTGGAAATATGCACGAATGCAAGCAGCAATCAGGGCTTCGGTGCAGAATGGAGACTCCTGCACCCCATCAATTAATATTGGAGCTGCAGAGGCTTTCGAATCAGAAATAACTGAATATATTAAAGAGCAGATTAGCTCTTACTTCACCGACAAACTCCTTGGATATGTTCGTGATATTGTTCTTCATATGAAGGGGATGGGCAGATCAGAAACCGACCAGAGTACATCATCTGGCCTTCCTCAACTTACAGATGATCTCCATCGAGGGGATGCAGCCTTGGAGCTTATCAAGCATGTCTGTGCTGTCCTTGCCCTCGACCAAAGTGTGCAGCATGATGTTCATGTAGTTATGAGAAAAAATTTGTTAAAATATGTTCGTGTCAGGGAGTTTGCTCCAGAAGCAGAGTTTCATGATCCTTGTCATTCCTTCGTACTACCCAATGTCATCTGCAGCTATTGTAATGACTGCCGAGATTTGGACTTGTGCCGTGATCCGACTTTATTGAACGAAGAGTGGCATTGTGCCGTACCTCAGTGTGGCCAGTCTTATGACCGTGAGGTGATGGAGAATGCTCTTCTTCAGATTGCACGACAAAGGGAACGACAATACCACTTGCAAGATCTGGTGTGTGTCAGGTGCAACCAGGTGAAAGCTGCACATTTGGCTGAGCAATGTGCATGTGCAGGCTCATTTAAGTGCCAGGAAGATGCAACGGAATTTCGCAAAAAGATGCGGGTTATCTTCACCATAGCTTCGCGTCAGAAATTCCAACTTCTTCAAGAATGTACCGCCTGGATGTTGGAACTCAAAATTTAA 6645 0.411 MNRDGRKWDRRDNNNKVSKKQKLINNAEEELEAKLGFDLFSEGEKRLGWLLTFSSSSYEDEDTSKVYSCVDLYFVKQDGSSFKTKYRFRPYFYVATKNKMEMDVDAYLRRRYESQIADINILEKEDLDLKNHLSGLRKSYLKLSFDTVQQLMNVKSDLMHVVERNKAKSDAAEAYESILTGRREQKLQDFLDCIIDLREYDVPYHVRFAIDNDIRCGQWYDVGVSNDGVTLERRTDLLQRAEVRVCAFDIETTKLPLKFPDADYDSIMMISYMVDRQGYLITNRECVGDDIEDLEFTPKPEFEGCFKVTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRAAYHGFKMSDELGFQCDMNQGECRAKFAPHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPKEVNPEDMVRFAKEKPQMMASYSVSDAVSTYYLYITYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQSYKANVVCPNKHQSDPEKFYKNHLLESETYIGGHVECLESGVFRSDIPCSFTLEPSAFEQLINNLDRDLQYAIRVEGKMDLESVSNYDEVKNAIMEKLVNLRDAPIRDECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGATFAAKKSDYYHLKKQIESEFVDGVNERSSKSFLDLPKAEQQLRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTVDSKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPIRKTYTTHSECSIEFEVDGPYKAMIIPASKEEGILIKKRYAVFNDDGSLAELKGFEIKRRGELKLIKVFQADLFEKFLHGSTLKECYSEVAKEANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGQQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKVSSDVGIRSIIDWSYYKQRLSSSIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKIDDTFKSVNKNERLKKPNDSSGIDLVMVDETVNDMEDFGNRSRSSAFGPRPIIRHYEANNEQHSEKFNGQEDSERQHIDSSNIDQSLSLSQQNETLSENVDRTVDYQGWLQIKKRKWKNMLGKRKKRRLENSKRSDHLNGSLEQTNSKMNHGRSNVSSYFRRHEVVLTRCHWQIIQLVHGPQVGQFFAWVVVDGLMLKIPISIPRVFYLNSRSPTEEFSGKHVNKTLPHGRHSYNLYEVTINEVQYQEESKKLAALLADPDVEGVYETKVPLEFNAIVQLGCVCKVDKAAKKRSLQEPWNLNELHMKTTTECAYLEQSISFFYLYHSILEGRAIYVGYFPGSQAITFVVVNPYQNQDLSPAFLDRQFRDACSALSIEPPPRNGINFKVEYVALVKDAETRMQSAINDHRSEHGPMVAVIECPDVQLLKLGIHALDDFPCLSIPSNARDSQYPILGWQQVAAKLGMQRCAASVQWLNERIALSRYAHVPLGNFEFDWLMFTVDTFFSRALRDNQQVLWISDDGFPDLGGNNGEENCFLDEVHQPVCTFPGAYRKISVELKIHHLAVDALLKCNQVNEMEGGALLGFGHEFDSEAFTGNGQNGFDESTSCAHAFRVLKHLIQRCLADAVTSGNVFADAVLQHLYRWLCSPHSKFHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFANFSKIIIDTGKYDLSTAKAYCDSLLRTIQSRDLFEWVELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDESQVDIISSWNIAEYLPKKIQDHYVYIVSEFIHIPWKYARMQAAIRASVQNGDSCTPSINIGAAEAFESEITEYIKEQISSYFTDKLLGYVRDIVLHMKGMGRSETDQSTSSGLPQLTDDLHRGDAALELIKHVCAVLALDQSVQHDVHVVMRKNLLKYVRVREFAPEAEFHDPCHSFVLPNVICSYCNDCRDLDLCRDPTLLNEEWHCAVPQCGQSYDREVMENALLQIARQRERQYHLQDLVCVRCNQVKAAHLAEQCACAGSFKCQEDATEFRKKMRVIFTIASRQKFQLLQECTAWMLELKI* 2215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1923 2214 Gene3D Palm domain of DNA polymerase 755 939 IPR023211 -
Mal7g1923 2214 Pfam DNA polymerase family B 758 1066 IPR006134 GO:0000166|GO:0003677
Mal7g1923 2214 CDD POLBc_epsilon 505 1124 - -
Mal7g1923 2214 Pfam Domain of unknown function (DUF1744) 1533 1898 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Mal7g1923 2214 Pfam DNA polymerase family B, exonuclease domain 75 402 IPR006133 -
Mal7g1923 2214 Gene3D - 240 470 IPR036397 GO:0003676
Mal7g1923 2214 MobiDBLite consensus disorder prediction 1291 1306 - -
Mal7g1923 2214 CDD DNA_polB_epsilon_exo 242 446 - -
Mal7g1923 2214 SMART polmehr3 241 844 IPR006172 GO:0000166|GO:0003676|GO:0003887
Mal7g1923 2214 SUPERFAMILY Ribonuclease H-like 65 469 IPR012337 -
Mal7g1923 2214 MobiDBLite consensus disorder prediction 1274 1306 - -
Mal7g1923 2214 Gene3D DNA Polymerase, chain B, domain 1 54 228 - -
Mal7g1923 2214 SUPERFAMILY DNA/RNA polymerases 488 1116 IPR043502 -
Mal7g1923 2214 Coils Coil 10 30 - -
Mal7g1923 2214 Gene3D - 943 1127 IPR042087 -
Mal7g1923 2214 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 34 2210 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Mal7g1923 2214 SMART DUF1744_2 1515 1898 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1923 5 2210 Core DNA Replication Machinery Family AT2G27120 67.557 0.0 3026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1923 K02324 - gmx:100812003 3808.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1923 7 68966354 68999038 Mal7g1923 7 68966354 68999038 ECH