Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1909 ATGAATTTTTATTCTCCTAATTTAAAAAACCAAAACCAATACTTCACTGAAAACTCCTTCTCGAATAATATCTATTGGGAATTAGAAGATTTCGTTAATGTCTTCAATGATGATATCACTTCCAACAAGTACTCACTATCACAAACGAAAGAATCTTTATTATTACCATTATCATTATCTGCTGAGTCCAACTCTTCATTATCATTGCTAGGCAATGGATCACTAGAAGTCTCATCCAATACACAAGTGATCAAAGATACACAATCATCATTATCATCATTATCATCCTCGCCAATTAAAGAAAATAACCAAAGCGTGTTTAGAGGAGTAAGAAGAAGGCCATGGGGGAAATTTGCAGCGGAGATAAGGGACTCAACAAGAAAAGGGGCTAGAGTATGGCTTGGAACATTCAACACGGCCGAAGAAGCTGCTTTAGCTTATGACCAAGCCGCTTTTTCAACAAGAGGCTCATCGGCAGTGTTGAATTTTCCAGAGGAAGTAGTTAAAGAATCACTGAAAGAAATGGCTAAAAACTCTAAGCCTTTGGAAGAAGGTACTTCCCCTGTGTTGGAAATCAAGAGAAAACACGTGAAGAGAAAATCATCCAAGGAGGTTCGTAAAAAGAAAACCGAAGCTGATCATCATAGTGATCGAATTCAGATAGAGACTAATACTAATTCTCAAAATGTGTTTGTGTTTGAGGATTTGGGTGCTGAATATCTGGAGCAACTATTGAGCTTGAATTCATGA 750 0.3707 MNFYSPNLKNQNQYFTENSFSNNIYWELEDFVNVFNDDITSNKYSLSQTKESLLLPLSLSAESNSSLSLLGNGSLEVSSNTQVIKDTQSSLSSLSSSPIKENNQSVFRGVRRRPWGKFAAEIRDSTRKGARVWLGTFNTAEEAALAYDQAAFSTRGSSAVLNFPEEVVKESLKEMAKNSKPLEEGTSPVLEIKRKHVKRKSSKEVRKKKTEADHHSDRIQIETNTNSQNVFVFEDLGAEYLEQLLSLNS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1909 249 Gene3D AP2/ERF domain 106 166 IPR036955 GO:0003700|GO:0006355
Mal7g1909 249 CDD AP2 105 165 IPR001471 GO:0003700|GO:0006355
Mal7g1909 249 ProSiteProfiles AP2/ERF domain profile. 106 164 IPR001471 GO:0003700|GO:0006355
Mal7g1909 249 Pfam AP2 domain 105 156 IPR001471 GO:0003700|GO:0006355
Mal7g1909 249 SUPERFAMILY DNA-binding domain 105 165 IPR016177 GO:0003677
Mal7g1909 249 PRINTS Ethylene responsive element binding protein signature 130 146 IPR001471 GO:0003700|GO:0006355
Mal7g1909 249 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
Mal7g1909 249 SMART rav1_2 106 170 IPR001471 GO:0003700|GO:0006355
Mal7g1909 249 MobiDBLite consensus disorder prediction 178 219 - -
Mal7g1909 249 PANTHER DNA-BINDING DOMAIN 18 246 IPR044808 GO:0003700|GO:0009873
Mal7g1909 249 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1909 Mal-Chr7 67797152 67797901 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1909 98 245 AP2-EREBP Transcription Factor Family AT3G23240 56.579 1.87e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g1909 AP2 4.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1909 K14516 - gmx:100801682 191.815