Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1894 ATGATGGAGTGTGATGTAGAGGAAAAAAAATTCATTGAGTGGCTCAAACCATCTTCCTCTTGTTCACATCTAACCTCATCTTCTTCTACCACTCAAAATGAAACTATTCAATTCTTTCCTATTTTGAGTGCAAAGTATTCAAAAGAGGATGAGCATGAAGAACCACAAATTGAGGATTTTGAGTTGAAAGAAGAAAAAGTTACCGTGGCTTTGCATATTGGATTACCTCATAACACTAAAAAATATCTTGATGATGAGATGAAGGTTTTTCATGTTAAAGAAGAAGAAGAAGAAGAAAAGCCTTCTAAGAAAACCTTCCAAAGGTTTTGGATACCAACTCTTGCACAGATCCTTGTTGGACCTATGCAATTTGCTTGCTCCATATGCAACAAAACCTTCAATAGGTATAACAACATGCAGATGCATATGTGGGGGCATGGATCTGAATTTAGGAAAGGACCAGACTCACTAAGAGGCACACAACCAGCTGCAATGCTAAGGCTACCATGCTACTGTTGTGTTCAAGGTTGCAAGAACAACATCGATCATCCAAGAGCTAAGCCTTTGAAAGACTTTAGAACTCTTCAAACTCACTACAAAAGAAAACATGGAACAAAACCATTTATGTGTAGAAAATGTGGGAAAACATTTGCTGTCAAAGGTGATTGGAGGACTCATGAAAAGAATTGTGGCAAGTTATGGTATTGCACTTGTGGTTCAGATTTTAAACACAAAAGATCTCTCAAAGATCATATTAGATCTTTTGGAAAGGGTCATCGTCGTCTTCCCTCGATTGATGATCAAGATTTCGAGGAGGAGAAGGAATGTGTTACTGGCTCTGAAGAAGATGAATTTGCTCGTATATGA 867 0.3772 MMECDVEEKKFIEWLKPSSSCSHLTSSSSTTQNETIQFFPILSAKYSKEDEHEEPQIEDFELKEEKVTVALHIGLPHNTKKYLDDEMKVFHVKEEEEEEKPSKKTFQRFWIPTLAQILVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGCKNNIDHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHRRLPSIDDQDFEEEKECVTGSEEDEFARI* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1894 288 SUPERFAMILY beta-beta-alpha zinc fingers 190 228 IPR036236 -
Mal7g1894 288 SMART c2h2final6 124 146 IPR013087 -
Mal7g1894 288 SMART c2h2final6 170 203 IPR013087 -
Mal7g1894 288 SMART c2h2final6 208 228 IPR013087 -
Mal7g1894 288 Gene3D Classic Zinc Finger 123 146 - -
Mal7g1894 288 Gene3D Classic Zinc Finger 204 264 - -
Mal7g1894 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 151 IPR013087 -
Mal7g1894 288 SUPERFAMILY beta-beta-alpha zinc fingers 115 147 IPR036236 -
Mal7g1894 288 Pfam C2H2-type zinc finger 124 143 - -
Mal7g1894 288 ProSitePatterns Zinc finger C2H2 type domain signature. 126 146 IPR013087 -
Mal7g1894 288 PANTHER ZINC FINGER PROTEIN WIP2 32 285 IPR043584 GO:0003700|GO:0010468
Mal7g1894 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 208 228 IPR013087 -
Mal7g1894 288 PANTHER ZINC FINGER PROTEIN WIP3-LIKE 32 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1894 Mal-Chr7 66013807 66018553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1894 7 278 C2H2 Transcription Factor Family AT1G08290 53.012 1.96e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g1894 zf-C2H2_6 9e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1894 - - gmx:100802773 423.705