Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal7g1891 | ATGGCGGAAGAACATAGATGTCAAGCTGCTCAACGTCTCTGTGCTAACAACTGCGGTTTCTTTGGAAGTCCCGCCATGCAAGATCTTTGCTCCAAATGTTACCGTGATTTGCAGATGAAGGAGCAACGTTCTTCATCTGCGAAATTGGTTTTCAATCAAACTCTAACTCCTCAGCCGTCTAATTTTACTTCTCTGGACACGGTGCTTATTCAGCCTTCTTCATCGTCGGTGGATTCTTCTTCATCTACACCGACGGTGGAGTTGTTAGCTGGACCTTCAGAGGCTGAACCGAAGGTCCATCCTAATCGATGCGGGACGTGTAAGAGGCGCGTGGGGCTGACGGGGTTCAAGTGTCGATGCGGATTGACGTTGTGTGGGACCCACAGGTATCCGGAGCTGCACGGTTGTGGGTTTGATTTTAAGGGGATGGGAAGGGAGGAGATCAAGAAAGCGAATCCGGTGGTGAAGGGGGAGAAGCTGAATAAGATCTGA | 492 | 0.5 | MAEEHRCQAAQRLCANNCGFFGSPAMQDLCSKCYRDLQMKEQRSSSAKLVFNQTLTPQPSNFTSLDTVLIQPSSSSVDSSSSTPTVELLAGPSEAEPKVHPNRCGTCKRRVGLTGFKCRCGLTLCGTHRYPELHGCGFDFKGMGREEIKKANPVVKGEKLNKI* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal7g1891 | 163 | MobiDBLite | consensus disorder prediction | 72 | 88 | - | - | |
| Mal7g1891 | 163 | Gene3D | - | 1 | 58 | - | - | |
| Mal7g1891 | 163 | Gene3D | - | 73 | 159 | IPR035896 | - | |
| Mal7g1891 | 163 | Pfam | A20-like zinc finger | 12 | 35 | IPR002653 | GO:0003677|GO:0008270 | |
| Mal7g1891 | 163 | ProSiteProfiles | Zinc finger A20-type profile. | 8 | 42 | IPR002653 | GO:0003677|GO:0008270 | |
| Mal7g1891 | 163 | Pfam | AN1-like Zinc finger | 104 | 140 | IPR000058 | GO:0008270 | |
| Mal7g1891 | 163 | SMART | A20_3 | 11 | 35 | IPR002653 | GO:0003677|GO:0008270 | |
| Mal7g1891 | 163 | PANTHER | ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 | 1 | 163 | - | - | |
| Mal7g1891 | 163 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 13 | 60 | - | - | |
| Mal7g1891 | 163 | SMART | AN1_Zf_4 | 104 | 141 | IPR000058 | GO:0008270 | |
| Mal7g1891 | 163 | SUPERFAMILY | AN1-like Zinc finger | 94 | 158 | IPR035896 | - | |
| Mal7g1891 | 163 | ProSiteProfiles | Zinc finger AN1-type profile. | 98 | 144 | IPR000058 | GO:0008270 | |
| Mal7g1891 | 163 | MobiDBLite | consensus disorder prediction | 72 | 94 | - | - | |
| Mal7g1891 | 163 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 1 | 163 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal7g1891 | Mal-Chr7 | 65962733 | 65963224 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal7g1891 | 1 | 163 | C2H2 Transcription Factor Family | AT3G52800 | 45.930 | 2.08e-44 | 142 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal7g1891 | - | - | egr:104433995 | 211.846 |