Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1871 ATGGCTGCTTCCTTAAATGACAAGTGGCAAAGGCTTTTGTTAAGGAATTTGGGTGCATTTCGGTTTCATTTTGAGGTTACTCTTTGGTTTAAGCTTATTTATTCCTTTGAAGTTCTTCCTCTGGAACAATGGCGAGACCTTTGGAAAAAAATCAAGAATCTCAGTGATTCAAAGTCAACATGGAAGATTGGTGTTCGTGTCGTAGATTTGTGGACTGTGGCGAATTCTAAGAATCGACAGCATTTGGAGATGGTTTTATGTGACAAAGAGGGTGATACTATTCAAGTCATAATTCCAAATGAATTCAAAGATCAGTTCAAGTCAAGAGTTGCAGAGAATGAAACTTTCATTCTGCAGAATTTTGAAGTGGAGAAGAATGAAATGACTATAAAAGCAACTCATCATAAGTTTAGGTTGGTTTTTAATGGTGGAACTATCATTGAAGATGTCAACAAACACAAAATTCCTAAGCCTATGTTCAAATTCAAGGACTTTGCTGATATCAAAGCTGGAAATGTTAGGCCAGATGTGCTAATTGATGTGATTGGAGCTTTTCATGAACTCGGATATACTCAAACTGTTGCTGGGAGTAGGAAAATCCAAATTAGCTTTTGGATGAAAGACCTGAAAGGAAACCTACTTAGCTGCACACTGTGGGAGGACTTTGGTCTGAAGTTTCTTGACTACACAAAGGGAAAAATGGATTTTGGTCCTACTATCATTATGCTTCACAATGCTAAGATAAAAGAGGCAACAGATAAGTACGAACTTGGTGTGTCTAATGCATGGAATGCGACAAAGTTGTTCATTAATGCTAATCTTCCAGAGATCAATGAATTCAAGAAAGGATTATGTGTTGATGAAGCAAGTTCATCACAGAGTACTCAGTTGAGTTTGGGATCTCAAATCATGTCTCAATCTTCATCTATGACACAATATTCTACTATTGATAAATTCATTGGTGTTGTTGTTGTCTTGCCACTATCTGAGATTATTAAGCTGAGGGAGACTACTACTTGCGTCACTGTTGTCAAGATGAAAAAAGTTAAACCAACAAAAAATGGATGGTACTACAAAGCATGCAGTAAATGTCCAAGGGCTGCAAAAGGCGATACTCTACCACTTTTGTGCTCTGAAAGACATGAAACAAATGCAATTAATCTGAGGTTCAAGTTAGATATGGAAGTTGAATTCAATCATATCACTTGTAAGTTTGTCTTTTGGGATAGAGAGTGTAATGAGTTGCTTGGAACTACTGCGGCTGATCTTCAGAGGATCATGACTGAGGCTGGAGTCACAAATCCTTTGGAATACCCAATGAAACTTGATGAATTGTCTGAAAGGGAGGTAGTTTGTAGAGTTAAGTGGCAACCAACATGGGATAGTTGTTCTGTTCAGGGAATTAAAATGGATGACTCTTTTGTTGAAAAGATCAAGGATTTTTTCCCGAAGGAACAGGATGCTGCTCTCTTGGCAATTGAAGGTCCTAACTTAGCTGAGGTTGATCTATCAAAAACATGTGAGAATGATTGCGAGAGTCTAGCTTCGCTAACTCCAGGGAAGAGAGTTGTTGTTGATGATGTTGAGAAAGATGCAAGCTCCCCAAATGTTGCTCCTACACAACTATCCTCCACTAAGTTGAAGAAGCATATCAAAGTTGAAAAGAAAGATTGA 1674 0.3799 MAASLNDKWQRLLLRNLGAFRFHFEVTLWFKLIYSFEVLPLEQWRDLWKKIKNLSDSKSTWKIGVRVVDLWTVANSKNRQHLEMVLCDKEGDTIQVIIPNEFKDQFKSRVAENETFILQNFEVEKNEMTIKATHHKFRLVFNGGTIIEDVNKHKIPKPMFKFKDFADIKAGNVRPDVLIDVIGAFHELGYTQTVAGSRKIQISFWMKDLKGNLLSCTLWEDFGLKFLDYTKGKMDFGPTIIMLHNAKIKEATDKYELGVSNAWNATKLFINANLPEINEFKKGLCVDEASSSQSTQLSLGSQIMSQSSSMTQYSTIDKFIGVVVVLPLSEIIKLRETTTCVTVVKMKKVKPTKNGWYYKACSKCPRAAKGDTLPLLCSERHETNAINLRFKLDMEVEFNHITCKFVFWDRECNELLGTTAADLQRIMTEAGVTNPLEYPMKLDELSEREVVCRVKWQPTWDSCSVQGIKMDDSFVEKIKDFFPKEQDAALLAIEGPNLAEVDLSKTCENDCESLASLTPGKRVVVDDVEKDASSPNVAPTQLSSTKLKKHIKVEKKD* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1871 557 SUPERFAMILY Nucleic acid-binding proteins 160 283 IPR012340 -
Mal7g1871 557 SUPERFAMILY Nucleic acid-binding proteins 328 457 IPR012340 -
Mal7g1871 557 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 88 424 - -
Mal7g1871 557 Gene3D - 301 481 IPR012340 -
Mal7g1871 557 PANTHER REPLICATION FACTOR A 1, RFA1 88 424 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal7g1871 557 CDD RPA1_DBD_A_like 62 147 - -
Mal7g1871 557 MobiDBLite consensus disorder prediction 529 557 - -
Mal7g1871 557 Pfam Domain of unknown function DUF223 83 178 IPR003871 -
Mal7g1871 557 Gene3D - 154 292 IPR012340 -
Mal7g1871 557 CDD RPA1_DBD_B_like 180 282 - -
Mal7g1871 557 SUPERFAMILY Nucleic acid-binding proteins 50 148 IPR012340 -
Mal7g1871 557 Gene3D - 49 152 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1871 Mal-Chr7 65463264 65467222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1871 51 282 Core DNA Replication Machinery Family AT5G45400 23.045 7.49e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1871 - - mtr:MTR_5g053590 596.66