Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1860 ATGGCCGAACAGCTTCGCACCCCCAAAACTAATACTGCTACACACGAAATGGCCGCCGCAGCTCGTCCCCTTGTGACTGTCTACACCGTCGAAGCCACCGACACCTCTGAAACCATCCACATCCCTGATCGTTACGCTGTTGTCTCCGCTATTGCTGCTTCTGCAATCTCTTCACTCGTCCTTGCTCGTGGTCACCTGATCGAATCTGTGCCAGAGATTCCTCTTGTTGGTGATTATGCTGAAGGTGTTGAGAAGACCAAGGATGCGATCCAGATTTTGAAATCAATTGGAGCTTACCCGATGCGGAGAAGGCGAAAGACAGCCTTGAGATCCGCTTTTCTGAACATTCCTGGTGTTGAGATCATGAATGTGGAAAGGTTGGATCTTTTGATGCTTGCACTTGGTGGGCATTTAGGGAGATTTGTGATTTGGACTAAATTGGCTTTTGAGAAATTGGATTGGATTTATGATAAGGCTTCTGAGAAGAAGAAGAAGGGTTATATGGTGAATTCTGATGTGACTAGGATTATTAATTCTGATGAGGTTCAGAGTGTTGTTAGGCCTCTGAAGAAGGAGGTGAAGAGGGCTACCTTGAAAAAGAATCCTTTGAAGAATTTGAATGTTATGCACAGGCTTAATCCTTATGATAAGACTGCTAAGAGGATGGCTTTGCTTGCTGCTGCTAAGAGGAGGATGGCTAGGAAGACTGATTTGAGTTTAGGAAGAACGTTGGGAAGAAAGCAATGGTTTCAAAAGGAAAGGGAGATGAGAAGAAAAAGAAAAGGAAGGCGGAAGGTGACCCATCTGATAAAAGGCGATCAAAGTGATGATGACCAATGA 840 0.4488 MAEQLRTPKTNTATHEMAAAARPLVTVYTVEATDTSETIHIPDRYAVVSAIAASAISSLVLARGHLIESVPEIPLVGDYAEGVEKTKDAIQILKSIGAYPMRRRRKTALRSAFLNIPGVEIMNVERLDLLMLALGGHLGRFVIWTKLAFEKLDWIYDKASEKKKKGYMVNSDVTRIINSDEVQSVVRPLKKEVKRATLKKNPLKNLNVMHRLNPYDKTAKRMALLAAAKRRMARKTDLSLGRTLGRKQWFQKEREMRRKRKGRRKVTHLIKGDQSDDDQ* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1860 279 Pfam Ribosomal protein L4/L1 family 44 153 IPR002136 GO:0003735|GO:0005840|GO:0006412
Mal7g1860 279 PANTHER BNAC03G35890D PROTEIN 44 100 - -
Mal7g1860 279 MobiDBLite consensus disorder prediction 253 279 - -
Mal7g1860 279 Pfam 60S ribosomal protein L4 C-terminal domain 167 231 IPR025755 -
Mal7g1860 279 SUPERFAMILY Ribosomal protein L4 44 153 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mal7g1860 279 Gene3D - 43 187 IPR023574 GO:0003735|GO:0005840|GO:0006412
Mal7g1860 279 PANTHER 60S RIBOSOMAL PROTEIN L4 111 240 IPR045240 -
Mal7g1860 279 PANTHER BNAC03G35890D PROTEIN 111 240 - -
Mal7g1860 279 MobiDBLite consensus disorder prediction 253 267 - -
Mal7g1860 279 PANTHER 60S RIBOSOMAL PROTEIN L4 44 100 IPR045240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1860 Mal-Chr7 65253871 65262286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1860 44 230 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 57.895 9.66e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1860 K02930 - gmx:100779764 227.639