Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1859 ATGCCAAGGGGAAAGCCAAATTCTTCATCGGATGGGAAGGAATCTGAGCCTGAGCCTGAAAAGCCAGTTGAATCTGATGAGAAGGTTGACCTTGAAGAGGAAAATGATCCTGAGGAAGAAATGGAAGAAGAAGTTGAGTATGAAGAAGTAGAAGAAGAGGAGGAAGTGGAAGAAATAGAAGAGGAGGTGGAAGAAGAGGAGGACCCAGAAGAGGTAGAGGAAGAAGAAGAGGAGGAGGAGGAAGAAGAGGTTGAAGAGGAAGAAGATGATGCCATGCAAAACCTTGATGAGGATGAGAAGAAAAAGCATGCTGAACTTCTTTCTCTTCCTCCTCACAAGTCTGAAGTCTACGTTGGTGGCATTCCTCTTGATGCCAAAACTGAAGATTTGAAAGAATTTTGTGAGCGAATTGGGGAAGTTGTACAGGTTCGAATAATGAAAGGAAAAGATGCTTCTGAGAATAAGGGCTTTGCTTTTGTTACTTACAGAAATGTAGATCTGGCTTCCAAAGCCATTGAGGAGCTGAATAATACTGAATTTAAGGGTAGGAAAATAAAATGTTCTACATCTCAAGCAAAAAATCGTCTTTTTATTGGTAATATTCCTAGAAGCTGGGGCGAAAAAGACCTGAAGAAGGTTGTGACTGACATAGGACCTGGAGTTACTGCTGTTGAACTAGTCAAGGATATGAAGAACATTAGCAATAACCGTGGCTTTGCTTTTATCGACTATCATAATAATCAGTGTGCTGAATATTCAAGGCTAAAGATGATGAGCCCATCATTTAAGCTTGGTGACAATTCCCCAACTGTGAGCTGGGCTGACCCTAAAAATGCTGATTCCTCTGCTTCATCCCAGGTGAAGGCAGTATATGTGAAGAACCTTCCCAAGAATGTAACTCAAGAGCAGTTGAAGAAGCTTTTTGAACACCATGGGAAGATCACAAAGGTGGTTCTACCACCACCAAAGTCTGGTCAGGAAAAGAACAGAATCGGCTTCGTACATTTTGCAGAGAGATCAAATGCTATGAAAGCACTAAAAAACACTGAAAGATATGAATTAGACGGTCAACATTTAGAGTGTTCTTTAGCAAAGCCACAGGCTGATCAGAAGGCCGTAGTATCAAATACACAGACGCAAGGATTGCTTCCAAGTTATCCGCCACATGTTGGTTATGGTTTGGTTGGGAATCCCTATGGCGCACTTGGTGCAGGATACGGTGCTCCTGGTCTTGCTCAGCCTTTGATGTATGGACCGGGTCAAACTCCTGGTGGAATGGCCATGATGCCGATGCTTCTGGCTGATGGACGCATTGGATATGTCTTGCAACAACCAGGATTGCAGCCACACACCCCACCAACCCCGCATACCCCGCCTTCACATCAAAGAGGTGGCAGGAGTGGCGGCGGCGGTGGTGGGAGTGGTGGCAACAGGAATACGGGCAGTTCTAGTAAAGGAAGGCAGAGCAATGATAGTGGCCAAGGGCGCAGATACCGCCCATATTAG 1506 0.4482 MPRGKPNSSSDGKESEPEPEKPVESDEKVDLEEENDPEEEMEEEVEYEEVEEEEEVEEIEEEVEEEEDPEEVEEEEEEEEEEEVEEEEDDAMQNLDEDEKKKHAELLSLPPHKSEVYVGGIPLDAKTEDLKEFCERIGEVVQVRIMKGKDASENKGFAFVTYRNVDLASKAIEELNNTEFKGRKIKCSTSQAKNRLFIGNIPRSWGEKDLKKVVTDIGPGVTAVELVKDMKNISNNRGFAFIDYHNNQCAEYSRLKMMSPSFKLGDNSPTVSWADPKNADSSASSQVKAVYVKNLPKNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVHFAERSNAMKALKNTERYELDGQHLECSLAKPQADQKAVVSNTQTQGLLPSYPPHVGYGLVGNPYGALGAGYGAPGLAQPLMYGPGQTPGGMAMMPMLLADGRIGYVLQQPGLQPHTPPTPHTPPSHQRGGRSGGGGGGSGGNRNTGSSSKGRQSNDSGQGRRYRPY* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1859 501 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 288 366 IPR000504 GO:0003723
Mal7g1859 501 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 290 359 IPR000504 GO:0003723
Mal7g1859 501 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 116 186 IPR000504 GO:0003723
Mal7g1859 501 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 196 252 IPR000504 GO:0003723
Mal7g1859 501 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 1 465 - -
Mal7g1859 501 MobiDBLite consensus disorder prediction 9 28 - -
Mal7g1859 501 PANTHER RNA RECOGNITION MOTIF 1 465 - -
Mal7g1859 501 SMART rrm1_1 115 188 IPR000504 GO:0003723
Mal7g1859 501 SMART rrm1_1 195 272 IPR000504 GO:0003723
Mal7g1859 501 SMART rrm1_1 289 362 IPR000504 GO:0003723
Mal7g1859 501 SMART rrm2_1 115 188 IPR003954 GO:0003676
Mal7g1859 501 SMART rrm2_1 289 362 IPR003954 GO:0003676
Mal7g1859 501 Coils Coil 38 101 - -
Mal7g1859 501 MobiDBLite consensus disorder prediction 1 92 - -
Mal7g1859 501 Gene3D - 195 275 IPR012677 -
Mal7g1859 501 SUPERFAMILY RNA-binding domain, RBD 281 372 IPR035979 GO:0003676
Mal7g1859 501 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 114 192 IPR000504 GO:0003723
Mal7g1859 501 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 194 276 IPR000504 GO:0003723
Mal7g1859 501 Gene3D - 30 194 IPR012677 -
Mal7g1859 501 Gene3D - 276 384 IPR012677 -
Mal7g1859 501 CDD RRM_SF 116 188 - -
Mal7g1859 501 SUPERFAMILY RNA-binding domain, RBD 114 280 IPR035979 GO:0003676
Mal7g1859 501 MobiDBLite consensus disorder prediction 473 495 - -
Mal7g1859 501 MobiDBLite consensus disorder prediction 29 92 - -
Mal7g1859 501 MobiDBLite consensus disorder prediction 443 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1859 Mal-Chr7 65246833 65251715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1859 130 455 Eukaryotic Initiation Factors Gene Family AT4G34110 25.843 2.89e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1859 K13161 - gmx:100806658 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1859 7 65246833 65251715 Mal7g1859 7 65246833 65251715 ECH