Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1816 ATGTCGGGTTCCCGAACTCCTCCCGCCGCCGCGCCGGAGCAGATCATGCAATCCATGAAACATCAACTCCCTTTCTCCTCCATGAAACCTCCCTTTGTTGCCGCCGGAGATTATCACCGCTTCGCCCCTGACCACCGCCGGAATCTCGACCAGGAAACTGAAGCTATCGTTGTTAAAACTCCTCAATTGAAGCGGAAGAGTGAAGCAGCTGATTTTGAAGCTGATTCAGGTGATAGGATGACTCCTGGATCCACTGCAGCAGCCAATAGTCCTGTTCAGACGCCTGCATCCGGTAAGACAGGGAAGGGAGGAAAATCCTCTAGGTTGACAAAATGCAACAGATCTGGAACTCAAACCCCAGGCTCAAATATCGGTTCTCCTTCAGGAAATAATCTCACCCCTGCTGGTCCATGTCGATATGACAGCTCATTAGGTCTGTTGACAAAAAAGTTCATCGCTTTAATAAAACAAGCAGAGGATGGTATTCTGGATCTAAATAATGCTGCTGACACATTAGAGGTGCAAAAGAGGAGGATATATGATATAACAAATGTTCTTGAAGGGATTGGCCTTATAGAAAAAAAGCTCAAGAACAGAATTCAGTGGAAGGGGCTGGATGTTTCAAAACCAGGGGAGGCTGATGATAGTTTTGGTAGTTTACAGGCAGAAATTGAAAATTTAACAATGGAGGAACACCGGTTGGATGAACAAATAAGGCAGATGCAAGAAAGACTACGGGATCTTAGTGAAGATGAAAATAATGAGAAGTTGCTTTTTGTCACTGAGGAAGATATAAAGAACTTGCCCTGCTTCCAGAATGAAACCTTGATAGCAATTAAAGCTCCACATGGCACCACTTTAGAAGTACCTGATCCTGATGAGGCTGTTGATTATCCCCAGAGGAGATACAGGATAGTCCTGAGAAGCACAATGGGCCCAATAGATGTTTACCTTGTTAGTCAATTTGAAGAGAAGTTTGAAGAGATCATCGGTGTTGATGTTGCGCCCAAATTTCCATCTAGTCCAGAAGTTAACAAGGATCCATCAACTGTGGTCCCAGAGGATAAAGGGAAAGAAATAGAAGTGCAGAGACAAGATGGTGAAGGCCCTAGTTCTTCAGATCTTACCAACAATCACGACTTCGTGAGTGGGATCATGAAGATTGTTCCTTCAGATGTTGCTAGTGATGCTGATTACTGGCTTTTATCAGATGCCGATGTTAGCATAACCGACATGTGGAGAACAGAACCGGGAGTTGAATGGAATGAACTTGACGCACTTCAAGAAGAATATTGTTTGGCCCGTGAGCAAACTACAACCCCAAATCATGCTTCAACTATTGGTGAAGTGCCTTCTGCATCCAAGCCTACTGTAGGATGA 1380 0.4449 MSGSRTPPAAAPEQIMQSMKHQLPFSSMKPPFVAAGDYHRFAPDHRRNLDQETEAIVVKTPQLKRKSEAADFEADSGDRMTPGSTAAANSPVQTPASGKTGKGGKSSRLTKCNRSGTQTPGSNIGSPSGNNLTPAGPCRYDSSLGLLTKKFIALIKQAEDGILDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSKPGEADDSFGSLQAEIENLTMEEHRLDEQIRQMQERLRDLSEDENNEKLLFVTEEDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEIIGVDVAPKFPSSPEVNKDPSTVVPEDKGKEIEVQRQDGEGPSSSDLTNNHDFVSGIMKIVPSDVASDADYWLLSDADVSITDMWRTEPGVEWNELDALQEEYCLAREQTTTPNHASTIGEVPSASKPTVG* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1816 459 MobiDBLite consensus disorder prediction 44 75 - -
Mal7g1816 459 Gene3D - 212 321 - -
Mal7g1816 459 SUPERFAMILY E2F-DP heterodimerization region 218 321 IPR037241 -
Mal7g1816 459 MobiDBLite consensus disorder prediction 44 134 - -
Mal7g1816 459 PANTHER TRANSCRIPTION FACTOR E2FB 17 446 - -
Mal7g1816 459 MobiDBLite consensus disorder prediction 349 365 - -
Mal7g1816 459 Coils Coil 217 258 - -
Mal7g1816 459 Coils Coil 155 175 - -
Mal7g1816 459 MobiDBLite consensus disorder prediction 82 134 - -
Mal7g1816 459 PANTHER TRANSCRIPTION FACTOR E2F 17 446 IPR015633 GO:0000978|GO:0006357
Mal7g1816 459 MobiDBLite consensus disorder prediction 337 377 - -
Mal7g1816 459 Gene3D - 133 206 IPR036388 -
Mal7g1816 459 SMART E2F_TDP_2 139 204 IPR003316 GO:0005667|GO:0006355
Mal7g1816 459 Pfam E2F transcription factor CC-MB domain 220 320 IPR032198 GO:0046983
Mal7g1816 459 CDD E2F_DD 215 321 IPR032198 GO:0046983
Mal7g1816 459 SUPERFAMILY "Winged helix" DNA-binding domain 139 202 IPR036390 -
Mal7g1816 459 Pfam E2F/DP family winged-helix DNA-binding domain 141 204 IPR003316 GO:0005667|GO:0006355
Mal7g1816 459 MobiDBLite consensus disorder prediction 437 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1816 Mal-Chr7 63751128 63756763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1816 11 432 E2F-DP Transcription Factor Family AT5G22220 56.951 3.13e-156 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mal7g1816 E2F_CC-MB 3.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1816 K06620 - gmx:100819817 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1816 7 63751128 63756763 Mal7g1816 7 63751128 63756763 ECH