Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1806 ATGGCAAGCAGCCGCAACACCTCTTCTTCTTCTTCAGATCTGGTGACATTGCCAAGGAGGAGGAATCATTACGACGTGTTTGTGAGCTTCAGAGGTGAAGATACTCGCTTCAACTTCACTGATCATCTTTTTGCTTCCCTTCAAAGAAAAGGCATTTTTGCATTTAGAGATGACAGTAAACTTCAAAAAGGTGAATCCATAGCACCCGAACTCTTTCATGCAATTCATGCTTCTCAAGTTTTCATTGTGGTCTTCTCCAAAAACTATGCTTCCTCAACATGGTGCTTGCGAGAATTGGAAAATATCCTTCAATGCAGTCAACTGTATGGAAAGCGTGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGCGAAAACAAAGTGGGAATTATGAAAAAGCCTTTGCCAAACACGTCGAACACGACTCTGACATGGTTCAACGATGGAGGGCAGCGCTTACAAAAGTGGGGAATATCTCTGGCTGGGATCTACGTGAAAAGAAAAAATGTCATCCAAAAGGCTTAGTTGGGGTAGATTCTCCTATAGAAGAATTAGAAAAGCTTTTACTTTTGGACTCAGATGATATTGTGCGGGTTGTAGGAATTTGTGGGATGGGAGGAATAGGAAAGACGACTCTTGCTACTTTTCTATATGGCAGAATCTCTCATCAATTTGTTGCCTGCTGCTTCATCGATGATATAAGCAAAGTTTATAGACATGGTGGTCCAATCGGTGCTCAAAAGCAAATTCTACAGCAAGCTCTAAGTGAAGATCACCTTCAGATATGCAATATTTACAACGCAAATAATTCGATACGAAGCAGGCTAAGTCATTTAAGGGTCCTTCTAGTTCTTGATAATGTTGATCAAGTTGAACAACTGGAGAAATTAGCTGTGAATAGTGAGTGTTTTGGTGCTGGGAGTAGAATCATTATAACTTCTAGAGATGCTCATATCTTGAAAGAGTATGGAGTTGATGAAGTTTACGAAGTTCCACTCTTGAATAAGACTGACTCTCTTCAATTATTTTGTCGAAAAGCTTTCAAACTTGATCATATTATCAATAGTTATGATAAGTTGGCATTTGACATACTAAGGTATGCTAATGGCCTACCTCTTGCAATTAAAGTTTTGGGCTCATTTTTGTTTGGTCGAGATATCTCAGAATGGAGAACTGCATTGGCTAGATTGAGAGAAAATCCAAACAAAGATATCATGGATGTGTTGCGATTAAGTTTTGAAGGGCTAGAGAAATTGGAAAAAGAAATATTTCTTGATATTGCTTGTTGTTTTAACAAAACGTATCACAAGGAATATCTTACCAATATTCTTAATTATTGTGGATTCCATCCTGATATTGGATTAAGAATTCTCATTGATAAATCACTTATAAGCATTGTTCACACATTTTATATTAAAATGCATAGTTTGTTAGTTGAGCTAGGCAGGAAAATTGTTCAAGAAAATTCGACCAAAGACTTGAGAAAGTGTAGCAGGATGTGGCTCCCCGAACATTTTGACAATGTAATGTTGGAGAATATGGAAAAGAACGTCGAAGCCATAGTTGTTTTGGAGCCTCACTGTCCAGGAAAAATAAAAACATTGACGGCGGAAACCTTGTCAAATATGGGTCATCTTAGATTACTCATAGTAAAAAATGTGCATTTTTCTGGAAGCCTGAGTTATCTTTCAAATGATTTGAGATATGTTAAGTGGCATGAATATCCTTTCATGTATTTGCCTATAAGTTTTCAGCCCAATCAACTTGTTGAATTAATCTTGAAGCATAGCAGCATCAAACAACTATGGGAAGGGAAGAAGTATCTGCCCAATTTGAGGAATATGGATCTGAAGCACTCCAAAAACCTAATCAAGATGCCAAATTTAGAAGAGGTTCCAAATCTTGAGCGGCTGAATCTCAAAGGATGTGTAAATCTTCTGCAGATGGATCCATCTATTGTTCATCTGAGAAAGCTTGTTTTCTTGAATGTGAAAAATTGCAAAAATCTAATAAGCATACCCAACGACATATGTTGTCTTAGCTCTCTTAAATATCTAAATCTTTCCGGGTGTTCCAAAGTGTTTAACAATCCTAAGCACTCCCAATCAATATTCTCCATGTTGAAATGGATCACGTTGCCTTTCCATTCCTTGTATCCCAAAGCACACAAAGGTTTAACTAGTTGTTTGCGGTCATCTTTGGCTAGCTTTTCTTTTTTGCGGGAACTTGATATTAGTTTTTGTGGTCTAAGCCAAATTCCAGATGCAATTGGATGTATGCGATGGCTAGGAAGATTAAATTTAATGGGAAACAATTTTGTGACACTGCCTAGTCTCGGGGAGCTTTCTAAACTTGTGTATCTAAACTTGCAGCATTGCAAGCAGTTGAAATTTTTGTCTGAGCTCCCTTTGCCTGACAGCATAACTTTGTCATGGATGATACAATTCATTCAGGCGAACCAAGAATCCTCTGCCTGCTTTCCTTGGATTGATATTGTTATTCCTAGAAGTGAAATACCAAGGTGGTTTAACAATCAGATCATAGGTAATTCAATAAGCATAGAACTATCTCCTATTGTGCGTGACAATAATTTTATTGGTCTTGCTTGCTGTGTAGTATTTTCTGTGACATTTGGTGATTCAACTATGCCAATGTTAAATAGAGGATCTGTAGTATCGCTAGGTTTTGAATCTGGCAATGCTTGGCAGTTATTTACTTTTTGTCCGGTAATTGCTGAAAGAGATTTGATTATGGTCGAATCAACCCACATGTGGCTAATCTATATCCCTCGGGAGTCATTCTTTGATTTTCTGAGCTCTACGAACTCAACATTCAGGGATCATGATCATACCATAATGAAAACTAAGCATGAGGACATAAAAGGTTTTCATGTGGAAGTGAAGAAATGTGGGTATTGTTGTATATATAAACAGGATCTACAACAGTTTAACTCAATGATGCACCACAGGAATTCATTTGCTCGGAAGCGCAAATTTTTGGCATTTGAAGATTAG 3018 0.3757 MASSRNTSSSSSDLVTLPRRRNHYDVFVSFRGEDTRFNFTDHLFASLQRKGIFAFRDDSKLQKGESIAPELFHAIHASQVFIVVFSKNYASSTWCLRELENILQCSQLYGKRVLPVFYDVDPSEVRKQSGNYEKAFAKHVEHDSDMVQRWRAALTKVGNISGWDLREKKKCHPKGLVGVDSPIEELEKLLLLDSDDIVRVVGICGMGGIGKTTLATFLYGRISHQFVACCFIDDISKVYRHGGPIGAQKQILQQALSEDHLQICNIYNANNSIRSRLSHLRVLLVLDNVDQVEQLEKLAVNSECFGAGSRIIITSRDAHILKEYGVDEVYEVPLLNKTDSLQLFCRKAFKLDHIINSYDKLAFDILRYANGLPLAIKVLGSFLFGRDISEWRTALARLRENPNKDIMDVLRLSFEGLEKLEKEIFLDIACCFNKTYHKEYLTNILNYCGFHPDIGLRILIDKSLISIVHTFYIKMHSLLVELGRKIVQENSTKDLRKCSRMWLPEHFDNVMLENMEKNVEAIVVLEPHCPGKIKTLTAETLSNMGHLRLLIVKNVHFSGSLSYLSNDLRYVKWHEYPFMYLPISFQPNQLVELILKHSSIKQLWEGKKYLPNLRNMDLKHSKNLIKMPNLEEVPNLERLNLKGCVNLLQMDPSIVHLRKLVFLNVKNCKNLISIPNDICCLSSLKYLNLSGCSKVFNNPKHSQSIFSMLKWITLPFHSLYPKAHKGLTSCLRSSLASFSFLRELDISFCGLSQIPDAIGCMRWLGRLNLMGNNFVTLPSLGELSKLVYLNLQHCKQLKFLSELPLPDSITLSWMIQFIQANQESSACFPWIDIVIPRSEIPRWFNNQIIGNSISIELSPIVRDNNFIGLACCVVFSVTFGDSTMPMLNRGSVVSLGFESGNAWQLFTFCPVIAERDLIMVESTHMWLIYIPRESFFDFLSSTNSTFRDHDHTIMKTKHEDIKGFHVEVKKCGYCCIYKQDLQQFNSMMHHRNSFARKRKFLAFED* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1806 1005 PRINTS Disease resistance protein signature 276 290 - -
Mal7g1806 1005 PRINTS Disease resistance protein signature 200 215 - -
Mal7g1806 1005 PRINTS Disease resistance protein signature 608 624 - -
Mal7g1806 1005 PRINTS Disease resistance protein signature 369 383 - -
Mal7g1806 1005 Gene3D - 22 170 IPR035897 -
Mal7g1806 1005 SUPERFAMILY Toll/Interleukin receptor TIR domain 20 163 IPR035897 -
Mal7g1806 1005 Gene3D - 334 418 IPR042197 -
Mal7g1806 1005 Pfam NB-ARC domain 183 404 IPR002182 GO:0043531
Mal7g1806 1005 ProSiteProfiles TIR domain profile. 22 190 IPR000157 GO:0007165
Mal7g1806 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 826 989 IPR044974 GO:0006952
Mal7g1806 1005 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 826 989 - -
Mal7g1806 1005 SUPERFAMILY L domain-like 533 802 - -
Mal7g1806 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 428 IPR027417 -
Mal7g1806 1005 SMART till_3 23 160 IPR000157 GO:0007165
Mal7g1806 1005 Pfam C-JID domain 836 981 IPR045344 -
Mal7g1806 1005 SUPERFAMILY "Winged helix" DNA-binding domain 405 507 IPR036390 -
Mal7g1806 1005 Gene3D Ribonuclease Inhibitor 527 711 IPR032675 -
Mal7g1806 1005 Gene3D Ribonuclease Inhibitor 722 829 IPR032675 -
Mal7g1806 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 723 804 IPR044974 GO:0006952
Mal7g1806 1005 Pfam Leucine Rich Repeat 589 608 IPR011713 -
Mal7g1806 1005 Pfam TIR domain 24 169 IPR000157 GO:0007165
Mal7g1806 1005 Gene3D - 171 328 IPR027417 -
Mal7g1806 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 175 697 IPR044974 GO:0006952
Mal7g1806 1005 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 175 697 - -
Mal7g1806 1005 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 723 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1806 Mal-Chr7 63470993 63475333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1806 24 790 WRKY Transcription Factor Family AT4G12020 31.051 1.14e-85 301