Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1793 ATGGCTGAAATCGAAATTCCTCCATATTTTGTATGTCCAATTTCATTTCAAATCATGAAAGAACCTGTGACAACAGTGACAGGAATAACATACGATAGAAAAAGCATTGAAAAATGGTTAATGAAAGCCAAAATTTGTGTGTGTCCGGTAACAAACCAATCATTACCAAGAAGTTCAGAGTATTTGACACCAAATCACACACTTCAAAGGCTAATCAAAGCATGGATTTCATCAAATGAAGCCAAAGTGGCTGATAATCAAATTCAATCTCCAAAATCTCCTCTCAATAGAATCCATCTTCAAAAGCTTGTCAAGAATCTTGAGCTTCCACATTGCTTTCAAACATCAATGGAGAAGATTCATGATCTTGCTAAACAAGGTGAGAGAAACAGAACTTGCATGGTTGAAGTAGGTGTAACCAAGGCTATGGTTATGGTGATTAAAAAGAAATTCAAAGAAGGAAACACCAATGGTTTAGAAGAAGCTTTGAAAATTATTCGTCTTTTGTGGAATGAAGCAATGATCAACAATATGATGACGCCTTTGGTTGGAAAAAACATGGATTTCATCAACTCGCTGACTTGGATTTTGAAAATTTACATTGATAACAACAATTTCGAGATGGTAAATGAAGTTCTTCCGTTATTAAAGTTGACAATTGAGGTTGTGGATTCAAACCTTTTAGGAAATTTAAACATTGAATTCTTTGCAACAATGGTTAGAGTACTTCGAAAGAGAGGATTATTCTCTAAACAAGCTATTAAATCGGCGTTACATGTGCTTTTAGAGACGTGCCCGTTGGGTAGAAACCGAAAGAGGATCGTGGAAGCGGATGGAGCGACCGAACTCATTGAAATCGAGCTTGAAAAACCCGAGAAGAGCATAACGGAGCTTGTGTTCAACCTTTTGGCACACTTGTGTTCGTGCGCGGATGGAAGAGAACAATTTTTGAGACATGCAGCGGGTATAGCGATGATTTCAAAAAGGATTTTGAGGGTTTCGGCCACAGCCGATGACTTAGCCATTCAAGTAATTTCGATGATTGCGAAGAATTCAACTTCGAAAGAGATTGTTTTAGAGATGTTGAGAGTTGGAGCGGTTTCAAAGCTTTGCATGGTAATGCAAGCGGATTGTGCTTCTTATTTGAAAGAGAGAGCAAGAGACATACTTAGGTTACACTCCACTTCTTGGAATAATTCTCCTTGCATACAATTGTACTTGTTAACTAGGATCCAAAGATGA 1242 0.3768 MAEIEIPPYFVCPISFQIMKEPVTTVTGITYDRKSIEKWLMKAKICVCPVTNQSLPRSSEYLTPNHTLQRLIKAWISSNEAKVADNQIQSPKSPLNRIHLQKLVKNLELPHCFQTSMEKIHDLAKQGERNRTCMVEVGVTKAMVMVIKKKFKEGNTNGLEEALKIIRLLWNEAMINNMMTPLVGKNMDFINSLTWILKIYIDNNNFEMVNEVLPLLKLTIEVVDSNLLGNLNIEFFATMVRVLRKRGLFSKQAIKSALHVLLETCPLGRNRKRIVEADGATELIEIELEKPEKSITELVFNLLAHLCSCADGREQFLRHAAGIAMISKRILRVSATADDLAIQVISMIAKNSTSKEIVLEMLRVGAVSKLCMVMQADCASYLKERARDILRLHSTSWNNSPCIQLYLLTRIQR* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1793 413 SUPERFAMILY ARM repeat 255 390 IPR016024 -
Mal7g1793 413 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 92 IPR013083 -
Mal7g1793 413 ProSiteProfiles U-box domain profile. 5 82 IPR003613 GO:0004842|GO:0016567
Mal7g1793 413 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PUB24 3 410 - -
Mal7g1793 413 SUPERFAMILY RING/U-box 4 83 - -
Mal7g1793 413 SMART Ubox_2 9 75 IPR003613 GO:0004842|GO:0016567
Mal7g1793 413 Gene3D - 108 397 IPR011989 -
Mal7g1793 413 Pfam U-box domain 6 80 IPR003613 GO:0004842|GO:0016567
Mal7g1793 413 PANTHER WDSAM1 PROTEIN 3 410 IPR045185 GO:0061630
Mal7g1793 413 CDD RING-Ubox_PUB 10 53 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1793 Mal-Chr7 62541556 62542797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1793 3 411 U-box Gene Family AT3G11840 36.947 1.71e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1793 - - gmx:100811293 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1793 7 62541556 62542797 Mal7g1793 7 62541556 62542797 ECH
Mal4g1339 4 19552487 19553698 Mal7g1793 7 62541556 62542797 PCT