Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1762 ATGAGTGATATAAGAAAATGGTTCATGAAAACACATGAAAAGTCCAATAATGCCGCCGCCGGTAACTCCAACAAACCCTCCGATCAACCCAAACCTCCTCCGGTTAAACCCGACCCGGAGAAAACGGTACCTGCTGAAGGCCAAGCAAGTTCAGGTAGAAGGAAAACTAGCAAGTATTTTAATACGGATAAACCGAAGCCAAACGATGAGGTAGAAACGCAGGCACTACCTGCTAAAAGAAAGACTAATGAAGATGACTCTGTTCTGCCCACTAATCAAAAGAAGTTAGCTGGTTCCACTCCTACTAAAAAATTGAAAAGTGGGTCAGGTAGGGGAATCTCTCAGAAATCTGTAGATTTGGATGAAAGTGATGAAGACGACGAGAAAGATGCTGTGACTCCTATTAAATCTGGTGGAAGGGGTCGTGGTGGAAGAGGAGCCTCAACACAAGCAACTGGTGGGAGAGGCCGAGGTGGTGGTAGGGGAACCACCCAGAAATCTGCAGCTATGGAAGAAAGTGATGAAGATGACGAGAAAAATGTTGTGTCTCCTGCTAAATCTGGTGGAAGGGGTCGTGGTGGAAGAGGAGCCTCAACACAAGCATCTGGTGGAAGGGGCCGAGGGGGTGGTAGGGGTGGATTCATGAATTTCGGTGAAAGAAAAGATCCTCCACACAAGGGAGAAAAGGAAGTTCCTGAAGGTGCTCCTAACTGTTTAGCTGGTTTAACGTTTGTAATCAGTGGAACACTGGACAGTTTGGAACGAGAAGAAGCAGAAGACTTGATCAAACGTCATGGTGGCCGTGTCACTGGATCAGTCAGCAAGAAAACAAACTATTTGTTATGTGATGATGATATTGGGGGAAGGAAGTCTGAAAAAGCTAAAGAGCTAGGAACTTCATTCCTCACAGAAGATGGTTTGTTTGATATGATTTGGGCATCTAAACCTGCAAAAGCTCCTAAGCAAGAGGAATGCAAGAAATCTGTGAGCAAGGCTGTTGCAGTGCCATCTCCGTCAAAAGTTCTTCCGAAAGTAGAAACTAAGGCCTCTTTGTCTTCATGCTCACCTTCCAACCTAGCCAAGCCTAAGAAAGCTGCTACTGCTCAGTCTAATTTGACGTGGACAGAGAAACATCGACCTAAAAATCCCAAGGATATCATAGGGAATCAGTCACTGGTTTCACAGCTTCGAAATTGGTTGAAAGTTTGGCATGAGCAATTTTCCAACACTGGTGGTAATAAAAAAGAAGGAAAAAAGCCGAATGACCCTACTTCCAAAAAGGCTGTCTTGTTGAGTGGAACCCCTGGTATAGGCAAAACAACTTCAGCAAAGCTGGTGTGTCAGGAGCTTGGTTTTCAAGCCATAGAGGTAAATGCTAGTGATAGCCGTGGAAAAGCTGATAGCAAAATTGAAAAAGGAATTGGTGGAAGTAATGCAAATTCTATCAAGGAACTTGTGACCAATGAGTCTCTTGGTCTTAATATGGATAGGTCAAAGCAGTCAAAAACTGTGCTCATTATGGATGAGGTCGATGGGATGTCAGCTGGTGATAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCGAAAATTCCTATTATCTGCATTTGTAATGACCGTTATAGCCAGAAACTAAAAAGCCTAATGAACTACTGTTTGCTTCTTAGTTACCGGAAGCCTACAAAGCAACAGATGGCAAAGAAGTTTATGGAGGTTGCAAAGGCTGAAGGGCTGCAAGTTAATGAGATTGCTCTTGAGGAATTAGCAGAAAGAGTTAATGGAGATATACGCATGGCACTAAACCAGTTACAATATATGGGCCTCTCCATGTCAGTTATCAACTACGATGATATTAGGCAGCGGTTACTTAGCAATGCGAAAGATGAAGACATTTCACCATTCACGGCTGTTGATAAGCTTTTTGGTTTTAATGCTGGAAAGATGAAAATGGATGAGAGGATTAATCTTAGCATGAGTGACCCTGATCTTGTTCCTCTACTTATCCAGGAAAATTATATTAATTATAGACCAAGCTCGGCTGGTAAGGATGACAATGGTGTAAAGCGCATGAACCTGATTGCCCGTGCTGCCGAGTCTATTGCTAATGGGGATATAGTGAATGTACAGATTCGCAGATATCGACAGTGGCAGCTCTCTCAAACTAGTTCTGTTGCATCATGTATACTTCCTGCTTCATTGTTACACGGGCAAAGGGAAACATTTGAAAAGGGAGAACGAAATTTTAACCGATTTGGTGGGTGGCTGGGGAAGAACTCGACAATGGGCAAAAACATGAGGCTTATGGATGACCTACATGTTCACATTCTTGCATCTCGCGAATCTAGCTCGGGGAGGGATACTATTCGCCTGGAATACCTTACTACTCTTCTAAAAAACTTGACAGAACCCCTCCGAGTTCTGCCTAAGGCTGAAGCTGTTGAGAAAGTTGTAGACTTTATGAATACATATTCAATCAGTCAGGAAGATTTTGACACTATAGTAGAGTTATCAAAATTCAAGGATCATCCTAATCCGCTAGATGGCATACAGCCTGCTGTTAAGTCAGCCTTGACTAAAGCATACAAAGAGCAAAGCAAAACTCGGACAGTTCGAGCTGCGGATCTAATTACTCTTCCTGGAATTAAAAAGGCACCTAAGAAGCGGATTGCTGCTATTTTAGAACCAGCTGATGAAGGAGTGGAGCAAGGTAATGGTGACAACACCTTGGATGAGAGTGAAGAAGAGAACAACTCTGACATAGATGAGTCAGAAGGTGCCGCAGCTGGCGAGAAGCTCAAGTCAGAACTTCAAAGTTTGAATTCAAAGGGCGTGCAAGTACAATTGGAATTGAAGGGAACGGGAAGTTCCAAGAAGGCATCCGGTGGTAGAGGTAAAAGTGCTTCTGCATCTGCGCAGAAGGTTGCTCAAACGTCAAAGACTCCTGCAAAAAGAAAAAGGTGA 2967 0.4348 MSDIRKWFMKTHEKSNNAAAGNSNKPSDQPKPPPVKPDPEKTVPAEGQASSGRRKTSKYFNTDKPKPNDEVETQALPAKRKTNEDDSVLPTNQKKLAGSTPTKKLKSGSGRGISQKSVDLDESDEDDEKDAVTPIKSGGRGRGGRGASTQATGGRGRGGGRGTTQKSAAMEESDEDDEKNVVSPAKSGGRGRGGRGASTQASGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDDDIGGRKSEKAKELGTSFLTEDGLFDMIWASKPAKAPKQEECKKSVSKAVAVPSPSKVLPKVETKASLSSCSPSNLAKPKKAATAQSNLTWTEKHRPKNPKDIIGNQSLVSQLRNWLKVWHEQFSNTGGNKKEGKKPNDPTSKKAVLLSGTPGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKIEKGIGGSNANSIKELVTNESLGLNMDRSKQSKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLMNYCLLLSYRKPTKQQMAKKFMEVAKAEGLQVNEIALEELAERVNGDIRMALNQLQYMGLSMSVINYDDIRQRLLSNAKDEDISPFTAVDKLFGFNAGKMKMDERINLSMSDPDLVPLLIQENYINYRPSSAGKDDNGVKRMNLIARAAESIANGDIVNVQIRRYRQWQLSQTSSVASCILPASLLHGQRETFEKGERNFNRFGGWLGKNSTMGKNMRLMDDLHVHILASRESSSGRDTIRLEYLTTLLKNLTEPLRVLPKAEAVEKVVDFMNTYSISQEDFDTIVELSKFKDHPNPLDGIQPAVKSALTKAYKEQSKTRTVRAADLITLPGIKKAPKKRIAAILEPADEGVEQGNGDNTLDESEEENNSDIDESEGAAAGEKLKSELQSLNSKGVQVQLELKGTGSSKKASGGRGKSASASAQKVAQTSKTPAKRKR* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1762 988 MobiDBLite consensus disorder prediction 218 232 - -
Mal7g1762 988 PIRSF RFC1 1 966 IPR012178 GO:0003689|GO:0005524|GO:0005663|GO:0006260|GO:0006281
Mal7g1762 988 CDD BRCT_RFC1 234 311 - -
Mal7g1762 988 Pfam ATPase family associated with various cellular activities (AAA) 429 529 IPR003959 GO:0005524|GO:0016887
Mal7g1762 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 622 IPR027417 -
Mal7g1762 988 MobiDBLite consensus disorder prediction 89 116 - -
Mal7g1762 988 SMART BRCT_7 236 314 IPR001357 -
Mal7g1762 988 MobiDBLite consensus disorder prediction 1 235 - -
Mal7g1762 988 CDD HLD_clamp_RFC 562 620 - -
Mal7g1762 988 Gene3D BRCT domain 211 312 IPR036420 -
Mal7g1762 988 MobiDBLite consensus disorder prediction 936 980 - -
Mal7g1762 988 MobiDBLite consensus disorder prediction 352 376 - -
Mal7g1762 988 Pfam BRCA1 C Terminus (BRCT) domain 236 311 IPR001357 -
Mal7g1762 988 MobiDBLite consensus disorder prediction 57 88 - -
Mal7g1762 988 SUPERFAMILY post-AAA+ oligomerization domain-like 633 778 IPR008921 GO:0003677|GO:0006260
Mal7g1762 988 Gene3D - 372 561 IPR027417 -
Mal7g1762 988 MobiDBLite consensus disorder prediction 909 923 - -
Mal7g1762 988 MobiDBLite consensus disorder prediction 352 387 - -
Mal7g1762 988 ProSiteProfiles BRCT domain profile. 234 312 IPR001357 -
Mal7g1762 988 CDD AAA 425 525 - -
Mal7g1762 988 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 12 961 - -
Mal7g1762 988 SUPERFAMILY BRCT domain 234 314 IPR036420 -
Mal7g1762 988 MobiDBLite consensus disorder prediction 895 988 - -
Mal7g1762 988 SMART AAA_5 425 563 IPR003593 -
Mal7g1762 988 MobiDBLite consensus disorder prediction 168 183 - -
Mal7g1762 988 Pfam Replication factor RFC1 C terminal domain 702 864 IPR013725 GO:0003689|GO:0005524|GO:0005663|GO:0006260
Mal7g1762 988 Gene3D - 562 632 - -
Mal7g1762 988 Gene3D - 634 744 - -
Mal7g1762 988 PANTHER REPLICATION FACTOR C SUBUNIT 1 12 961 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1762 1 945 Core DNA Replication Machinery Family AT5G22010 65.063 0.0 1086
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1762 K10754 - gmx:100802809 1337.01