Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1672 ATGTTCCAGTCAAACCTATTGGAAGCTGGTCAGTTCCATCCATTAGAGATGATGCAAAACACTTCAGAAAACCGTGAAGATGAATGCTTCGAAAGTGCCACAAAATCTTGCAGTGAAAACCATGAAGGTGGTGCTGCTTCTGGTGAAGACCAAGAACCACGTCCCAAAAGAAAACGTTACCACCGCCACACTCAGCATCAGATCCAAGAAATGGAAGCCTTTTTTAAGGAGTGTCCACATCCAGATGACAAGCAAAGGAAGGAGTTAAGCAGAGAGTTAGGGCTAGAGCCTTTGCAAGTCAAGTTTTGGTTTCAAAACAAAAGGACTCAAATGAAGACACAACATGAACGTTCAGAGAACTCACAGCTAAGGGCAGAAAATGAAAAGCTTAGGACTGATAACATGAGGTATAGGGAAGCACTTAGCAATGCTTCATGTCCTAATTGTGGTGGTCCTACAGCTATAGGTGAAATGTCATTTGATGAACAACATTTGAGGCTTGAAAATTCAAGGCTAAGAGAAGAGATTGATCGAATTACAACAATGGCAGCCAAGTACTTAGGCAAGCCAGTGGGAAACTATTCACCATCTCTCCCACCACGTCAAGAAATTGGTTTTGGCAACCAACAAGGGATTGGTGCTATGGACATGTATGGAACTAGTGGCGATCTTTTAAGGTCGATTAGTGGGCCGACCGAAGCAGACAAACCAATAATAATAGAATTAGCTGTTGCAGCCATGGAAGAGCTTATTGGGATGGCACAAATGGGTGATCCACTTTGGTTAAGTACTACACTTGATGGAGCTGCTACTGTGCTTAATGAAGATGAGTATGTTAGGTCATTTCCTCGTGGGATTGGACCTAAACCTAATGGTTTCAAATGTGAAGCTTCTAGAGAAACTAGTGTTGTTATCATGAATCATGTCAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGTCAACAGTGTTTGCTGGTATTGTTTCAAGAGCTATGACTGTGGAGGTGTTGTCAACTGGAGTGGCAGGGAACTACAATGGTGCTTTACAAGTGATGACAGCAGAGTTTCAAGTACCTTCACCTCTTGTGCCAACTCGTGAGAGTTACTTTGTAAGGTATTGTAAGCAACATACCGATGGGACATGGGCAGTTGTGGATGTGTCTTTGGATAATCTCCGCCCTAGTCCTTCATCTAGATGTAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAGATGCCAAATGGTTACTCAAAGGTGACATGGGTTGAGCATGTAGAAGTGGATGAAAGAGGAGTTCATAATCTATACAAGCAGCTTGTTAGCACTGGCCATGCATTTGGTGCAAAACGTTGGGTTGCAACATTAGATCGACAATGTGAAAGGCTTGCTAGCTCCATGGCCACAAACATTCCCACAGTAGATGTTGGCGTGATAACAAACCAAGAAGGGAGGAAGAGTATGTTGAAACTAGCAGAGAGAATGGTGATAAGTTTTTGTGGTGGAGTGAGTGCTTCAACAGCACATACATGGACAACACTATCTGGAACAGGAGCTGATGATGTTAGAGTGATGACACGTAAGAGTGTTGATGATCCTGGAAGACCACCTGGTATTGTTCTTAGTGCTGCTACTTCTTTTTGGCTTCCTGTTCCACCTAAACAAGTCTTTGATTTCCTTCGTGATGAACACTCCAGAAATGAGTGGGATATTCTTTCCAATGGTGGAGTGGTCCAAGAAATGGCACACATTGCAAATGGACGAGATACTGGAAATTGTGTCTCTCTACTTAGAGTAAATAGTGCCAATTCAAGCCAGAGCAACATGCTGATATTACAAGAGAGTGTAACAGATTCAACAGGCTCATTTGTGATCTATGCACCAGTAGACATTGTTGCTATGAATGTGGTTCTAAATGGAGGCGATCCGGATTATGTAGCACTTCTTCCGTCAGGATTCGCTATCCTCCCTGATGGAAATGGTGAAACTGGAGGAGCAACTGGTGGTGGTGGATCCCTTTTGACAGTTGCTTTCCAAATATTGGTTGATTCTGTTCCAACTGCTAAACTTTCACTTGGATCTGTTGCTACTGTTAATAGTCTTATTGCTTGTACTGTTGAGAGAATCAAAGCTTCTTTATCTGGTGAAGGTGCTTGA 2157 0.4279 MFQSNLLEAGQFHPLEMMQNTSENREDECFESATKSCSENHEGGAASGEDQEPRPKRKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERSENSQLRAENEKLRTDNMRYREALSNASCPNCGGPTAIGEMSFDEQHLRLENSRLREEIDRITTMAAKYLGKPVGNYSPSLPPRQEIGFGNQQGIGAMDMYGTSGDLLRSISGPTEADKPIIIELAVAAMEELIGMAQMGDPLWLSTTLDGAATVLNEDEYVRSFPRGIGPKPNGFKCEASRETSVVIMNHVNLVEILMDVNQWSTVFAGIVSRAMTVEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRESYFVRYCKQHTDGTWAVVDVSLDNLRPSPSSRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDERGVHNLYKQLVSTGHAFGAKRWVATLDRQCERLASSMATNIPTVDVGVITNQEGRKSMLKLAERMVISFCGGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKQVFDFLRDEHSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESVTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGNGETGGATGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKASLSGEGA* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1672 718 Coils Coil 113 140 - -
Mal7g1672 718 SMART HOX_1 55 118 IPR001356 GO:0003677
Mal7g1672 718 CDD homeodomain 56 115 IPR001356 GO:0003677
Mal7g1672 718 CDD START_ArGLABRA2_like 236 461 - -
Mal7g1672 718 SUPERFAMILY Homeodomain-like 48 114 IPR009057 -
Mal7g1672 718 SUPERFAMILY Bet v1-like 481 710 - -
Mal7g1672 718 Pfam Homeodomain 57 112 IPR001356 GO:0003677
Mal7g1672 718 MobiDBLite consensus disorder prediction 1 65 - -
Mal7g1672 718 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 22 715 IPR042160 -
Mal7g1672 718 SUPERFAMILY Bet v1-like 232 464 - -
Mal7g1672 718 Pfam START domain 242 462 IPR002913 GO:0008289
Mal7g1672 718 MobiDBLite consensus disorder prediction 20 35 - -
Mal7g1672 718 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Mal7g1672 718 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Mal7g1672 718 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 22 715 - -
Mal7g1672 718 Gene3D - 280 459 IPR023393 -
Mal7g1672 718 ProSiteProfiles START domain profile. 232 465 IPR002913 GO:0008289
Mal7g1672 718 Gene3D - 44 131 - -
Mal7g1672 718 SMART START_1 241 462 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1672 Mal-Chr7 57446755 57452552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1672 1 718 Homeobox Transcription Factor Family AT1G05230 77.248 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal7g1672 START 3.9e-59 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1672 7 57446755 57452552 Mal7g1672 7 57446755 57452552 ECH
Mal4g1285 4 18601332 18606193 Mal7g1672 7 57446755 57452552 PCT