Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1579 ATGGCAAGAACTCCTTCTTGTGACAAAAGTGGAATGAGGAAAGGGACTTGGACTGCTGAAGAAGATAGGAAATTAATTGCTTATGTCACTAGATATGGTTGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGATTGAGGTGGCTGAATTATTTAAGGCCTAATATCAAAAGAGGAAACTTCACTGAAGAAGAAGAGGAGTTGATTATCCGTATGCATAAAAAGCTTGGGAATAGATGGTCAACCATTGCTGCTGAGTTACCCGGAAGAACAGATAATGAAGTGAAGAACCATTGGCACACTTCCCTAAAGAAAAGAGTTCAACACAACATAATCACAAATGAAGAAACCAAAGCCACAAAATCAAAAGACATTATCCTCATTAGTCCTCCAACTAGTTTCCAAATCTCAGACACCACTGGCCCATTATCCCCATTTTCATCATCTAGTGAATTCTCTCCCACATCTTCAGATCACAGTTCCAATGCTTTGGATGATTTTGGGTTTCTAGATTCATTTATAGAATCTGTGGATGAAAGTTTTTGGCTTGATGATCTTTCCAACACACCAAGTGAAATAGTGCAAGACAATAATGATGCTTTTTTAGTGTCTCCCAGTCATTCGTACAACGAAAGTTTTGTTCTGGAAAATGATTTTGGCAACTTACTAGATGGGTACACTGAGTCAACAGTTGATAGTTTTTGGACACAACCATATGAGGCTAACATGCCCTACGTTCCAGCTGAACTGCTGGCACCTTTGCCGATGGAATCTGAATATTTTTCTGTATTATATGATGATAATATTTGGAGTTGA 843 0.3915 MARTPSCDKSGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRGNFTEEEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRVQHNIITNEETKATKSKDIILISPPTSFQISDTTGPLSPFSSSSEFSPTSSDHSSNALDDFGFLDSFIESVDESFWLDDLSNTPSEIVQDNNDAFLVSPSHSYNESFVLENDFGNLLDGYTESTVDSFWTQPYEANMPYVPAELLAPLPMESEYFSVLYDDNIWS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1579 280 CDD SANT 69 112 IPR001005 -
Mal7g1579 280 Gene3D - 14 66 - -
Mal7g1579 280 CDD SANT 16 61 IPR001005 -
Mal7g1579 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal7g1579 280 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal7g1579 280 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Mal7g1579 280 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal7g1579 280 SMART sant 66 114 IPR001005 -
Mal7g1579 280 SMART sant 13 63 IPR001005 -
Mal7g1579 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 225 - -
Mal7g1579 280 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal7g1579 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal7g1579 280 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal7g1579 280 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 225 - -
Mal7g1579 280 Gene3D - 68 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1579 Mal-Chr7 51657824 51658772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1579 1 196 MYB Transcription Factor Family AT2G31180 50.510 4.27e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g1579 Myb_DNA-binding 3.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1579 K09422 - gmx:778087 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1579 7 51657824 51658772 Mal7g1579 7 51657824 51658772 ECH