Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1578 ATGGCGGATAAAACAAAGAAGTCTAAGGGTGCCAAAAGGAAGTCAAATATGCCGCTTGTTGAGGACGTTATACAAAGGTTGGGATCCGAAGGAGCTGAGCAGGTTTTGGAGGAGGTGATTCGGGCGACCCCGTTGTCGAGTTTGCGGTTATTAACAACGGACAACGGGGAAGATTGGCAAGAGTTGGCGGAAAGGGGTGGTGAGGGATCCTCTTTGAAGGTGTTAGAGTCTTCAAAACTTTTTGGAATTCAAAAAGCTTTGGGAGTGTCAGAGGCAAAGGAGAACTCTTTAAAAGGTACTTTGGTTGATAGGGTCGAGATTGTTGAGGGCAGAAAGGGTATGGCAAGAACTCCTTCTTGTGACAAAAGTGGAATGAGGAAAGGGACTTGGACTGCTGAAGAAGATAGGAAATTAATTGCTTATGTAACTAGATATGGTTGCTGGAATTGGCGCCAACTCCCTAAATTTGCAGGTTTATCAAGGTGTGGGAAGAGTTGTAGATTGAGGTGGTTGAATTATTTAAGGCCTAATATCAAAAGAGGGAACTTCACTCAAGAAGAAGAGGAGTTGATTATCCGAATGCATAAAAGGCTTGGAAATAGATGGTCAACCATTGCTGCTGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACTATTGGCACACTTCCCTAAAGAAGAGAGCTAAAGACACAAATGAAGAAACCAAATCCACCAAAACAAATATCATTTTTGAATCCACACAAGAGAGGGATATTACTCCTCTAGCCAATTACAAAATCTCAGACATTACTGGCCCATTATCTCCACTTTCATCATCCAGTAAATTTTCTTCCACAAATTACTCAGATCACAGTTCCACTGCTCTGGATGATTTTGGTTTTCTAGATTCATTTATAGAATCTGTGGATGAAAGTTTTTGGCTGGATGACCTTTCCTACAAACCAGGTGGAACAGTGCAAGACAATACTACCAATAATGATGCTTTTTTAGTGTCTCCCAATAATACGTCCAATGAAAGTTTGGTTCTGAATAATGATTTTGGTAGCTATCTAAATGGGTGCACAGAGTCAACAGTTGATAGTTTTTGGACACAACCGTATGAAGCTGATATGTCCCACGTTCGAAGCCAAGTGCTGACACATTTGCCGATGGAATCTGAATATTATTCTATAGTATATGATGATGATATTTGGAGTTGA 1203 0.4065 MADKTKKSKGAKRKSNMPLVEDVIQRLGSEGAEQVLEEVIRATPLSSLRLLTTDNGEDWQELAERGGEGSSLKVLESSKLFGIQKALGVSEAKENSLKGTLVDRVEIVEGRKGMARTPSCDKSGMRKGTWTAEEDRKLIAYVTRYGCWNWRQLPKFAGLSRCGKSCRLRWLNYLRPNIKRGNFTQEEEELIIRMHKRLGNRWSTIAAELPGRTDNEVKNYWHTSLKKRAKDTNEETKSTKTNIIFESTQERDITPLANYKISDITGPLSPLSSSSKFSSTNYSDHSSTALDDFGFLDSFIESVDESFWLDDLSYKPGGTVQDNTTNNDAFLVSPNNTSNESLVLNNDFGSYLNGCTESTVDSFWTQPYEADMSHVRSQVLTHLPMESEYYSIVYDDDIWS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1578 400 Pfam Myb-like DNA-binding domain 180 223 IPR001005 -
Mal7g1578 400 Pfam Myb-like DNA-binding domain 127 174 IPR001005 -
Mal7g1578 400 SUPERFAMILY Homeodomain-like 124 221 IPR009057 -
Mal7g1578 400 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 114 353 - -
Mal7g1578 400 CDD SANT 182 225 IPR001005 -
Mal7g1578 400 Gene3D - 181 250 - -
Mal7g1578 400 ProSiteProfiles Myb-like domain profile. 122 174 IPR001005 -
Mal7g1578 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 122 174 IPR017930 -
Mal7g1578 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 175 229 IPR017930 -
Mal7g1578 400 SMART sant 126 176 IPR001005 -
Mal7g1578 400 SMART sant 179 227 IPR001005 -
Mal7g1578 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 114 353 - -
Mal7g1578 400 ProSiteProfiles Myb-like domain profile. 175 225 IPR001005 -
Mal7g1578 400 Gene3D - 127 179 - -
Mal7g1578 400 CDD SANT 129 174 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1578 Mal-Chr7 51641736 51646125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1578 114 313 MYB Transcription Factor Family AT2G31180 49.505 6.31e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g1578 Myb_DNA-binding 6.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1578 K09422 - gmx:778087 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1578 7 51641736 51646125 Mal7g1578 7 51641736 51646125 ECH