Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1575 ATGGTAAGAGCTCCTTTCTATGACAAAAATGGTGTTAAGAAAGGTGCATGGAGTAGAGATGAAGATTCGAGGTTAAGTGATTATATTCAGAAACATGGTCATTCTAATTGGCGTCAACTCCCCAAGCTTGTGTGGATAAGTTGCAGACTTCGTTGGTTAAATTACTTAAAGCCAAATCTTAAACATGGGAACTACACAAGCGAAGAAGAAGAAACCATCATCAAATTACACCACCAACTTGGAAACAAATGGTCCTTGATTGCTGAAAATCTTACTGGAAGAACCGACCACGAGATAAAGAACTATTGGCACAGCTACCTAAAAAAATGTTCAAAGAGCATTGACTATAAGGTCACAATTTCTGAGTTTAAATCTAAACAATGTGATACTGTTGAAGGAAATGAAAGTCATCATTCTATAACACCTGAAAGCCCAAGTTCTGATGTTGGCAAGGACTTTCATTATATTTTAGAAAGCTCAATAATAACCATGTCAAGAGAAGCATCTGTGGAAGACAACTCTTCCCCTACCTCCATGAACTGCCCTATAATTGAAGAAGACAATGTTGCTCCATGGTTAGAGTTCGAAGCATTTGGCGGCGATTTTTGGAATGATCCATGCATACTAGAAGATACATACACCACTAATGAGATATCAAGTGAAGACATAGACTTCTTGATTTCAGACTTCTATGATGGTTCATATATGTTTTAG 714 0.3725 MVRAPFYDKNGVKKGAWSRDEDSRLSDYIQKHGHSNWRQLPKLVWISCRLRWLNYLKPNLKHGNYTSEEEETIIKLHHQLGNKWSLIAENLTGRTDHEIKNYWHSYLKKCSKSIDYKVTISEFKSKQCDTVEGNESHHSITPESPSSDVGKDFHYILESSIITMSREASVEDNSSPTSMNCPIIEEDNVAPWLEFEAFGGDFWNDPCILEDTYTTNEISSEDIDFLISDFYDGSYMF* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1575 237 SMART sant 61 109 IPR001005 -
Mal7g1575 237 SMART sant 13 58 IPR001005 -
Mal7g1575 237 Gene3D - 64 135 - -
Mal7g1575 237 CDD SANT 16 56 IPR001005 -
Mal7g1575 237 CDD SANT 64 107 IPR001005 -
Mal7g1575 237 ProSiteProfiles Myb-like domain profile. 9 56 IPR001005 -
Mal7g1575 237 Pfam Myb-like DNA-binding domain 14 56 IPR001005 -
Mal7g1575 237 Pfam Myb-like DNA-binding domain 63 107 IPR001005 -
Mal7g1575 237 SUPERFAMILY Homeodomain-like 11 103 IPR009057 -
Mal7g1575 237 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Mal7g1575 237 Gene3D - 7 62 - -
Mal7g1575 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 56 IPR017930 -
Mal7g1575 237 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 216 - -
Mal7g1575 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Mal7g1575 237 PANTHER MYB TRANSCRIPTION FACTOR 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1575 Mal-Chr7 51346511 51348615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1575 1 109 MYB Transcription Factor Family AT5G16770 60.526 5.08e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g1575 Myb_DNA-binding 2.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1575 K09422 - gmx:100781032 205.297