Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1574 ATGGTAAGAGCTCCTTATTTTGACAAAAATGGAACAAAGAAAGGTGCATGGAGTGAGGAAGAGGATCAGAGGCTTATTGCTCACATTGAGAAACATGGTCATCCTAATTGGCGTCAACTTCCCAGAGCTGCAGGTTTAGCAAGATGTGGAAAGAGTTGTAGGCTGCGTTGGATGAATTATTTGAGGCCAAATCTAAAACGAGGGAACTATACACAGAAGGAGGAACAAATGATCATGGAATTGCATAAAAAGCATGGAAATAAGTGGTCTCTAATAGCTGAAAGTCTACCTGGAAGATCAGACAACGAAATAAAGAATTATTGGCATAGCAACCTACAAAAATTCTCAAGGCGCAATGATAGTGTCCATCAAAATTCATATCCATCCGAACAATCTATCTTATCATCCCTAAATGACACCAAGCTCACAAAGGAGATTGGAAGTACAAAAAGGACAAGTGAGGCTGTTAGTTTTGATTCCCACAACAATATTTTGGAAAGTTCATCTTCAGTGCCCTCTGAAATGTCCAACACTGCTAATTCCCCTTCAATTTCCTCTAGTCGTGTGGAATCAAATGTCAACTTGTACAAAAATGACGATTGTGTTGCTTCTTGGGAAACATGGGATGGATTTAGCAACAATTTTTGGACTGAACCGTTTGTTTTAGAAAGTGCATTGACTCAGGATAATTTTCTCATTTCATGCTATGGAGCAGAGGCTGAGGATCCATTTTTTACATGGTAG 744 0.3925 MVRAPYFDKNGTKKGAWSEEEDQRLIAHIEKHGHPNWRQLPRAAGLARCGKSCRLRWMNYLRPNLKRGNYTQKEEQMIMELHKKHGNKWSLIAESLPGRSDNEIKNYWHSNLQKFSRRNDSVHQNSYPSEQSILSSLNDTKLTKEIGSTKRTSEAVSFDSHNNILESSSSVPSEMSNTANSPSISSSRVESNVNLYKNDDCVASWETWDGFSNNFWTEPFVLESALTQDNFLISCYGAEAEDPFFTW* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1574 247 CDD SANT 69 112 IPR001005 -
Mal7g1574 247 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mal7g1574 247 CDD SANT 16 61 IPR001005 -
Mal7g1574 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mal7g1574 247 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal7g1574 247 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 237 - -
Mal7g1574 247 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal7g1574 247 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mal7g1574 247 SMART sant 13 63 IPR001005 -
Mal7g1574 247 SMART sant 66 114 IPR001005 -
Mal7g1574 247 Gene3D - 7 66 - -
Mal7g1574 247 Gene3D - 69 113 - -
Mal7g1574 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mal7g1574 247 PANTHER MYB TRANSCRIPTION FACTOR 1 237 - -
Mal7g1574 247 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1574 Mal-Chr7 51291271 51293400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1574 1 196 MYB Transcription Factor Family AT5G16770 47.783 2.56e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g1574 Myb_DNA-binding 4.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1574 K09422 - gmx:100782270 301.597