Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1566 ATGGCTAAGTTTTATTGTTTTGCTCCTTTGGCCTTTTTCATAGTGCTCTTCTTACATGTGGCCATGGCTCGCATGCCCATTGACTCAAAATGGCACAATGCCAGTGCAACCTTCTATGGTGACATGAATGGTGGAGAAACCATGCAGGGGGCTTGTGGTTATGGAAATCTCTTTGAACAAGGCTATGGGCTTGAAACCACAGCATTGAGCACGGCACTCTTTAATAATGGTTATAGTTGTGGTGCCTGTTTTGAAATCAAGTGTGTCAACGACCCACAATGGTGCAAAACAGATGTGAACTCGATTACGGTAACGGCGACAAATTTTTGCCCTCCGAATTACATCGACGGAAGTTGGTGTAACCCTCCACATGAACATTTTGACTTGAGCCAGAAAATGTTCACGACGATTGCCATATACAGAGCAGGAATCGTCCCAGTTCAGTATCGACGTGTTCCCTGCATCAAAAGAGGTGGTGTTAGATTTCAACTAAGCGGAAACCCTTATTTTTTAATGGTTTTGGTGTATAATGTTGCAAATGCTGGCGATATTTTACGCGTGTCAATCAAAGGGTCTAATACTGATTGGGCTCCGATGACACATAATTGGGGACAAAATTGGCATACCGGAGTTAAATTGGTTGGACAAGACTTGTCATTTTGGGTAACAACAAGTGATCGAAAAGCATTGAAGTTTTCTTCTGTTGTTCCTTCTAATTGGCAATTTGGACAAACCTACGAAGGATCGGTCAATTTTTAG 759 0.4242 MAKFYCFAPLAFFIVLFLHVAMARMPIDSKWHNASATFYGDMNGGETMQGACGYGNLFEQGYGLETTALSTALFNNGYSCGACFEIKCVNDPQWCKTDVNSITVTATNFCPPNYIDGSWCNPPHEHFDLSQKMFTTIAIYRAGIVPVQYRRVPCIKRGGVRFQLSGNPYFLMVLVYNVANAGDILRVSIKGSNTDWAPMTHNWGQNWHTGVKLVGQDLSFWVTTSDRKALKFSSVVPSNWQFGQTYEGSVNF* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1566 252 Gene3D - 20 154 IPR036908 -
Mal7g1566 252 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Mal7g1566 252 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Mal7g1566 252 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Mal7g1566 252 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Mal7g1566 252 PRINTS Expansin signature 117 134 IPR002963 GO:0009664
Mal7g1566 252 PRINTS Expansin signature 134 147 IPR002963 GO:0009664
Mal7g1566 252 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Mal7g1566 252 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Mal7g1566 252 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Mal7g1566 252 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Mal7g1566 252 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Mal7g1566 252 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Mal7g1566 252 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Mal7g1566 252 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Mal7g1566 252 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Mal7g1566 252 Gene3D - 159 252 IPR036749 -
Mal7g1566 252 SMART dpbb_1 66 149 IPR007112 -
Mal7g1566 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 159 IPR007112 -
Mal7g1566 252 SUPERFAMILY Barwin-like endoglucanases 16 177 IPR036908 -
Mal7g1566 252 PANTHER EXPANSIN-A21-RELATED 14 252 - -
Mal7g1566 252 PANTHER EXPANSIN-A15 14 252 IPR002963 GO:0009664
Mal7g1566 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
Mal7g1566 252 Pfam Lytic transglycolase 66 149 IPR009009 -
Mal7g1566 252 SUPERFAMILY PHL pollen allergen 156 248 IPR036749 -
Mal7g1566 252 Pfam Expansin C-terminal domain 160 237 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1566 Mal-Chr7 50987461 50988481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1566 27 252 Expansin Gene Family AT5G39280 62.719 4.52e-109 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1566 - - cam:101510232 421.009