Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1538 ATGTGCTTGAGTGGTGGAGGTTTAGCGGCATATGGTGATAGCAGAGCAGCATATAGTGATAGTAGTCATCAAAGCCAAAGAAAGAAAGTGGTGGTGCTTGGAACTGGTTGGGCTGGAACTAGTTTTGTGAAAAGCATGAAAAACTCATCCTATGATATTCATGTTGTTTCACCACGTAACTATTTTGCCTTCACTCCCTTGCTACCAAGTGTTACTTGTGGCACAGTGGAGGCACGAAGCGTTGTTGAACCAATTCGAAAAATCAGCAGAATGAGTCGTTTAGATGTTCAATTCAGTGAAGCTGAATGCTATAAAATTGATCCAAAGAACAACAAAGTTTACTGCAGAGCTTGTCATGACAAAAAGCTTGGTGGCGTAGAAGAATTTTCAATTGATTATGATTACTTAGTAATAGCTATGGGAGCTCGTTCTAATACTTTTAACACACCTGGTGTTGAGGAGCATGCCTACTTCTTGAAGGAAGTGGAAGATGCTATGAGAATCCGCACAAAAGTGATTAACCTTTTTGAAAGAGCAAGCCTCCCTTCTGTACCAGTGGAAGAGAAGAAAAAGCTACTTAGTTTTGTAGTTGTTGGTGGTGGTCCAACTGGAGTAGAGTTTGCTGCTGAGCTACATGATTTTGTGCATGAAGATCTCTCTAAATTATATCCTTCTATTATAGACCATGTCAAGATTACTCTCCTTGAGGCTGGTGATCATATCTTAAACATGTTTGACAAGAGAATAACAGAATTTGCTGAAGAAAAGTTCAAAAGAGATGGAATTGATGTGAAATTGGGATCAATGGTGGTGAAAGTTGGTGAAAACGATATCTCATCCAAAGAAAGAGGAAGTGGTCAAGTTGTTACTATGCCTCATGGAATGGTAGTTTGGTCAACTGGCATTGGTGCTCGTCCTGAAGTACTTGATTTTATGAAGCAACTTGGCCAGATTAATCGGCGTGCATTGGTCACTGATGAATGGCTAAGAGTGGAAGGGTGTGACAACATCTATGCTTTAGGTGATTGTGCCACTATAAATCAGCGTAGAGTTATGGAAGATATAGCTGTGATATTTAACAAGGCAGACAAGGATAATTCCGGAATGTTAGATCTTAAAGAATTTCAAAACGTTGTTGGTGACATTATTGAGAGGTATCCACAAGTGGACATTTATTTAAAGAATAACCAAATGAAAGACATGGCCACTTTGCTAAGTAAATCTCAGGAAAACCCTGCTACAGTAGTGGACATTGATTACTTTAAACAAGCTCTTTCTAAAGTTGATTCTCAGATGAAAAATCTTCCTGCAACTGCTCAGGTAGCTGCTCAACAAGGAGCCTATCTTGCAGACTGTTTCAATCGCATGGAATTGTGTGAGAAATATCCAGAAGGCCCTCTAAGGTTTAGGGGAACAGGACGCCATCGGTTTCATGCCTTCAGGTACACGCATCTTGGACAATTTGCTCCTCTTGGGGGAGAACAAACAGCAGCTCAGCTTCCAGGAGATTGGGTTTCAATTGGACATAGCAGTCAGTGGTTGTGGTATTCGGTATATGTAAGCAAACTAGTGAGCTGGAGAACAAGAGCTTTGGTGGTATCTGATTGGGGAAGGCGATTCATATTTGGAAGGGACTCAAGTCAATTATGA 1650 0.4067 MCLSGGGLAAYGDSRAAYSDSSHQSQRKKVVVLGTGWAGTSFVKSMKNSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRKISRMSRLDVQFSEAECYKIDPKNNKVYCRACHDKKLGGVEEFSIDYDYLVIAMGARSNTFNTPGVEEHAYFLKEVEDAMRIRTKVINLFERASLPSVPVEEKKKLLSFVVVGGGPTGVEFAAELHDFVHEDLSKLYPSIIDHVKITLLEAGDHILNMFDKRITEFAEEKFKRDGIDVKLGSMVVKVGENDISSKERGSGQVVTMPHGMVVWSTGIGARPEVLDFMKQLGQINRRALVTDEWLRVEGCDNIYALGDCATINQRRVMEDIAVIFNKADKDNSGMLDLKEFQNVVGDIIERYPQVDIYLKNNQMKDMATLLSKSQENPATVVDIDYFKQALSKVDSQMKNLPATAQVAAQQGAYLADCFNRMELCEKYPEGPLRFRGTGRHRFHAFRYTHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYVSKLVSWRTRALVVSDWGRRFIFGRDSSQL* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1538 549 SUPERFAMILY FAD/NAD(P)-binding domain 27 246 IPR036188 -
Mal7g1538 549 SMART efh_1 354 382 IPR002048 GO:0005509
Mal7g1538 549 PRINTS FAD-dependent pyridine nucleotide reductase signature 133 151 - -
Mal7g1538 549 PRINTS FAD-dependent pyridine nucleotide reductase signature 30 49 - -
Mal7g1538 549 PRINTS FAD-dependent pyridine nucleotide reductase signature 194 212 - -
Mal7g1538 549 PRINTS FAD-dependent pyridine nucleotide reductase signature 322 344 - -
Mal7g1538 549 ProSiteProfiles EF-hand calcium-binding domain profile. 350 385 IPR002048 GO:0005509
Mal7g1538 549 ProSitePatterns EF-hand calcium-binding domain. 363 375 IPR018247 -
Mal7g1538 549 SUPERFAMILY EF-hand 344 435 IPR011992 -
Mal7g1538 549 PANTHER NAD(P)H DEHYDROGENASE B2 46 549 - -
Mal7g1538 549 Pfam Pyridine nucleotide-disulphide oxidoreductase 28 353 IPR023753 GO:0016491
Mal7g1538 549 Gene3D - 394 548 - -
Mal7g1538 549 Gene3D - 19 364 - -
Mal7g1538 549 SUPERFAMILY FAD/NAD(P)-binding domain 187 347 IPR036188 -
Mal7g1538 549 PANTHER NADH DEHYDROGENASE 46 549 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1538 Mal-Chr7 50012174 50016477 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1538 3 549 Chloroplast and Mitochondria Gene Families AT4G21490 68.897 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1538 K03885 - gmx:100790773 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1538 7 50012174 50016477 Mal7g1538 7 50012174 50016477 ECH