Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1480 ATGGTGTTGGCCGATGAAAAGTCCAATTACATACATGCTTCTATACCAAGCAGATTTGCACATGGTTTTCGAAAAACACTGCAAGAGGAAAAAATTTACGTCATCAACCAATTTGATGTGATGAGAAATAAACAGAAATATGTTGTGGTTGAAAAAAACCCCTCTATGCTACAATTTCATCCCAACACAGACATTGTTGAGACTGATTTTGATGATGGAAAAATCCCTTTGTATGTTTTTGAGTTTGTGGATTTTGAAAAATTTGAAGAACGAGTTGACAAGGAAGTTTTGACAGATGTCATTGGAGTTATCACTGATGTAAATCCAATTGAAGAGGTTATCACTGTTAATGGTACAGTTGACAGGGTGAAACTTGAATTGAAGGATATAAGGGGAAACACCGTGAAAGTGACGTTGTGGGATGAATATGCTACAATATTTGAAGAGACGCTCAATAACAACAAGCATGACGGTCTTACCCCAAATGTTGCAGTAATCACTTCCACTTCCGTAAAGAGATTTCGAGGTGATATATGTCTTTCTGCATCAAGATCGACAAAGATTTACATCAACATAGACATTCCAAATGCAAATGAGCTCATTCCATCTTTTGGCTTAAACAGAACCATATCAGAGCTTTTATCTTTGGCACTGTCCGGGAGTAATATGGATGTTGTGTATTATTGTGCAGCAACAATAACTGACATAGGGGATAGATGGTACTATTTTTCTTGCCCTAAATGTAAAAAGGGAGCTTCTGCGACTGAAACAAATTTTGACTGTGAACATTACTCGACAGATTCCACTATATTTGTATTGTTTGGTGAAGTTGCTGAACAAGTGGTACAGATGAAACTAAGTGACTTGATCTCAACTTTGGAAAATGAAAATGAGGATAGCTCAATAGTGCCTCATCAACTCAACAAAATCATTGGCTCCACTCATGTATTCCAAGTTAGTATGAAAAATTACTATGGGGGTCGTGGGAGACAAAGTTTCACTGTTTATAGGATTGTGAAGCCGAAAGTGAAGGTTGAGAAAGAAGACAAATCTGAAAACAATGGTGCTGCATCATGTGGTTTTCCCAATCCACGTACTCCAAAATTACCACAAAAGAGAAGGTTAAGATATTTAATTTCCTTCCTTTTTTTTCCCATTTTGCAAGAGGATGATGAATCATCCAGTGTGGAGCAAATGCAAGATCTGGAAGATTTAGAGGCCTGA 1224 0.3725 MVLADEKSNYIHASIPSRFAHGFRKTLQEEKIYVINQFDVMRNKQKYVVVEKNPSMLQFHPNTDIVETDFDDGKIPLYVFEFVDFEKFEERVDKEVLTDVIGVITDVNPIEEVITVNGTVDRVKLELKDIRGNTVKVTLWDEYATIFEETLNNNKHDGLTPNVAVITSTSVKRFRGDICLSASRSTKIYINIDIPNANELIPSFGLNRTISELLSLALSGSNMDVVYYCAATITDIGDRWYYFSCPKCKKGASATETNFDCEHYSTDSTIFVLFGEVAEQVVQMKLSDLISTLENENEDSSIVPHQLNKIIGSTHVFQVSMKNYYGGRGRQSFTVYRIVKPKVKVEKEDKSENNGAASCGFPNPRTPKLPQKRRLRYLISFLFFPILQEDDESSSVEQMQDLEDLEA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1480 407 PANTHER REPLICATION FACTOR A 1, RFA1 1 348 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal7g1480 407 SUPERFAMILY Nucleic acid-binding proteins 208 346 IPR012340 -
Mal7g1480 407 PANTHER BNAC08G15530D PROTEIN 1 348 - -
Mal7g1480 407 Gene3D - 265 352 IPR012340 -
Mal7g1480 407 Gene3D - 208 264 IPR012340 -
Mal7g1480 407 CDD RPA1_DBD_B_like 99 201 - -
Mal7g1480 407 Gene3D - 1 67 IPR012340 -
Mal7g1480 407 MobiDBLite consensus disorder prediction 347 367 - -
Mal7g1480 407 CDD RPA1_DBD_C 210 353 IPR013955 -
Mal7g1480 407 Pfam Replication protein A OB domain 91 191 IPR031657 -
Mal7g1480 407 Gene3D - 74 207 IPR012340 -
Mal7g1480 407 SUPERFAMILY Nucleic acid-binding proteins 80 207 IPR012340 -
Mal7g1480 407 CDD RPA1_DBD_A_like 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1480 Mal-Chr7 47239714 47242384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1480 3 341 Core DNA Replication Machinery Family AT5G08020 24.810 2.35e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1480 - - mtr:MTR_4g070090 344.739