Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1477 ATGGAACATTTGAACTACATTCCTTCAAATCGTATTATGTTTTCTCATCGAGATCCTAACATTCGAAAAACTGGATTTGCTAATGTGTTCATTAAGAATCTAGACACATCAACAAACAACAAGGCATTGCACAATACTTTTGATGCCTTTGGAACCGTGGTTTCTTGTAAGGTAGCTCTAGATATCAATGGTCAATTTAGGGGATATGGTTTTGTGTAA 219 0.3516 MEHLNYIPSNRIMFSHRDPNIRKTGFANVFIKNLDTSTNNKALHNTFDAFGTVVSCKVALDINGQFRGYGFV* 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1477 72 SUPERFAMILY RNA-binding domain, RBD 7 72 IPR035979 GO:0003676
Mal7g1477 72 Gene3D - 16 72 IPR012677 -
Mal7g1477 72 PANTHER RNA BINDING PROTEIN 1 72 - -
Mal7g1477 72 PANTHER POLYADENYLATE-BINDING PROTEIN 1 72 - -
Mal7g1477 72 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 72 IPR000504 GO:0003723
Mal7g1477 72 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 72 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1477 Mal-Chr7 47162318 47162536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1477 1 72 Eukaryotic Initiation Factors Gene Family AT4G34110 57.895 4.98e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1477 K13126 - vvi:100263065 112.079