Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1445 ATGGAGAAGAGCAACGACAAAGCTTGTGGGAAGTGGTTCTCCAATGAGAAAGCCATTGGAGGCCACTTGAGATCTCACTTGGTCAAATTGCTGATTCCTCCAAAGCTTGAAACTAATAATCAAGTTGTAGAAAATTCGGCCGATTTAACCCAGCGTCCAAGTCAATCTGCTTCCGCAGAGACTTGCCATCCCGACAACTTCTCTGCAAGCTCAGAAGAAAACGAATCCGTGTCTTACCAGAAAACCCCAACCCGCAACGCTACAAAAGATATGTCGAGAGATCCAGGTGTTGTGATGGTAGTAGGTTTTTACCAAGACGCGCGAAAAAGAGAAGGGATCAAGAAACAAAAAATAAAGGCAGAAGACGGCGAAAGCAGTAGAGGTGACTCGCTTGCTCAAGCAGACTCTCAAGCCAGGTTCAACTGTGACAGGTGCAGAAAAATGTTCCGATCTTATCAAGCTCTTGGAGGGCACAAATCATACTGCAAAAGTGACAATTATGGTGATTTAATAGATCAAAAACCTTTTCAGTGCCCATATTGCAACAAAGTGTTCAAGTCTGCTCAAGCACTCGATGGACACAAGAGTGTACACTTTTCCAATGCTAATGAATTTGAAGGGTGTCAGTAG 630 0.4397 MEKSNDKACGKWFSNEKAIGGHLRSHLVKLLIPPKLETNNQVVENSADLTQRPSQSASAETCHPDNFSASSEENESVSYQKTPTRNATKDMSRDPGVVMVVGFYQDARKREGIKKQKIKAEDGESSRGDSLAQADSQARFNCDRCRKMFRSYQALGGHKSYCKSDNYGDLIDQKPFQCPYCNKVFKSAQALDGHKSVHFSNANEFEGCQ* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1445 209 MobiDBLite consensus disorder prediction 112 128 - -
Mal7g1445 209 MobiDBLite consensus disorder prediction 35 92 - -
Mal7g1445 209 MobiDBLite consensus disorder prediction 112 133 - -
Mal7g1445 209 SUPERFAMILY beta-beta-alpha zinc fingers 140 198 IPR036236 -
Mal7g1445 209 ProSitePatterns Zinc finger C2H2 type domain signature. 178 198 IPR013087 -
Mal7g1445 209 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 105 203 - -
Mal7g1445 209 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 105 203 IPR044303 GO:0006355
Mal7g1445 209 Gene3D Classic Zinc Finger 112 201 - -
Mal7g1445 209 MobiDBLite consensus disorder prediction 38 86 - -
Mal7g1445 209 ProSiteProfiles Zinc finger C2H2 type domain profile. 176 203 IPR013087 -
Mal7g1445 209 SMART c2h2final6 140 160 IPR013087 -
Mal7g1445 209 SMART c2h2final6 7 26 IPR013087 -
Mal7g1445 209 SMART c2h2final6 176 198 IPR013087 -
Mal7g1445 209 Pfam C2H2-type zinc finger 9 26 - -
Mal7g1445 209 Pfam C2H2-type zinc finger 139 162 - -
Mal7g1445 209 Pfam C2H2-type zinc finger 176 198 - -
Mal7g1445 209 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 7 84 IPR044303 GO:0006355
Mal7g1445 209 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 7 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1445 Mal-Chr7 45416331 45416960 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1445 2 205 C2H2 Transcription Factor Family AT1G02030 27.119 1.56e-15 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g1445 zf-C2H2_6 1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1445 - - cam:101511854 177.178