Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1444 ATGGAGAAGAGCAACGGCAAAGCCTGTGGAATTTGTGGGAAGTGGTTCTCCAGTGGGAAAGCCATTGGCGGCCACTTGAGATCTCACTATGTCAAATTGCCAATTCCTCCAAAGCTTGAAACTAATAATCAAGCTGGAGACAATTCGGCCGATTTAACCCAACGTCGAAATCAATCTGCTTCCGCACAAACTTGCAATCCTGACAACTTCTCCGCCTTCTCTGCAAGCTCAAACAGAGAAAATGAATCTGTGTCTTACCAGAAAACCCTAACCCACAAAAGATCTGAATGCAGCCGCGAACTTAATGCAGCGGATGATACAAAAGATATGTCAGAAGATCCAGGTGTTATGATGGTATGGGGATTTTACAAAGATGCGCAAAAAAGGGAAGGGATCAAGAAACAAAAAATAAAGGCAGAAGACGGCGAAAGCAGTAGAGGTGACTCGCTTGCTCAAGCAGACCCTCGAGCAAGGTTTAACTGTGACAGGTGCGGAAAAATGTTCCGATCTTACCAAGCTCTTGGCGGGCACAAAGCATACTGCAAAAGTGACAATGATGGTGGTTTAATAGATCAGAAACCTTTTCAGTGCCCATATTGCACCAGAGTGTTCAAGTCTGCTCAAGCACTCGGTGGACACAAGAGGGTACACTCTTCCAGTGCTAATGAATTCGAAGGGTGTCAGTAG 687 0.4541 MEKSNGKACGICGKWFSSGKAIGGHLRSHYVKLPIPPKLETNNQAGDNSADLTQRRNQSASAQTCNPDNFSAFSASSNRENESVSYQKTLTHKRSECSRELNAADDTKDMSEDPGVMMVWGFYKDAQKREGIKKQKIKAEDGESSRGDSLAQADPRARFNCDRCGKMFRSYQALGGHKAYCKSDNDGGLIDQKPFQCPYCTRVFKSAQALGGHKRVHSSSANEFEGCQ* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1444 228 MobiDBLite consensus disorder prediction 133 147 - -
Mal7g1444 228 MobiDBLite consensus disorder prediction 133 152 - -
Mal7g1444 228 SMART c2h2final6 7 29 IPR013087 -
Mal7g1444 228 SMART c2h2final6 195 217 IPR013087 -
Mal7g1444 228 SMART c2h2final6 159 179 IPR013087 -
Mal7g1444 228 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 221 - -
Mal7g1444 228 ProSiteProfiles Zinc finger C2H2 type domain profile. 195 222 IPR013087 -
Mal7g1444 228 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 221 IPR044303 GO:0006355
Mal7g1444 228 MobiDBLite consensus disorder prediction 41 85 - -
Mal7g1444 228 MobiDBLite consensus disorder prediction 36 110 - -
Mal7g1444 228 Gene3D Classic Zinc Finger 131 220 - -
Mal7g1444 228 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
Mal7g1444 228 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Mal7g1444 228 MobiDBLite consensus disorder prediction 86 110 - -
Mal7g1444 228 Pfam C2H2-type zinc finger 9 29 - -
Mal7g1444 228 Pfam C2H2-type zinc finger 158 181 - -
Mal7g1444 228 Pfam C2H2-type zinc finger 195 218 - -
Mal7g1444 228 ProSitePatterns Zinc finger C2H2 type domain signature. 197 217 IPR013087 -
Mal7g1444 228 SUPERFAMILY beta-beta-alpha zinc fingers 159 217 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1444 Mal-Chr7 45410628 45411314 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1444 9 224 C2H2 Transcription Factor Family AT1G02030 29.237 2.56e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g1444 zf-C2H2_6 2.9e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1444 - - cam:101511854 224.942