Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1442 ATGAGATCTCATTTGGTCAAATTGCCGATTCCTCCAAAGCTCGAAACTAACGATCAAGCCAATTTAACCCAGCGTCCAAATCAATCTGCTTCCTCACTGGATTGCCATCCTGAAAAACAACAGACACAGAATTTCCGATCTGTGAAGCGCGAATTCTCTTCCTTCTCTGCAAACTCAAACACAGAAAACGAATCGGTGTCCTACCCGAAAAACCCAACCCACAAAAGATCCAAATGCCGCAACGAACTTAATGCAGCCGCTGATACAAAAGATCTTCCAAGAGATCCAGATCCAGATGTTATGACGTTATGGGGCTTTTACAAAGATGCGCAAAAGAGGGAAGAGATCAAGCAAAAAATAAAGGAAACCAACAAAACAAAGGAAAACGACGGTGAAGGCAGTAGAGATGACTCGCTTCTTCAAGCTCACACTCAAGACAACTTCAAGTGTGAGAGGTGTGGAAAAATGTTCCAATCTTATCAAGCTCTTTGTGGGCACAAAGCATACTGCAAAAGTGACAACAATGGTGATTTAATAGATCAGAAACCTTTTCAGTGCCCATATTGCAACAGAGTGCTCAAGTCAGCTCAAGCACTCGGTGGACACAAGAGGGTACACTTTTCCAGTAGATCTTAA 636 0.4277 MRSHLVKLPIPPKLETNDQANLTQRPNQSASSLDCHPEKQQTQNFRSVKREFSSFSANSNTENESVSYPKNPTHKRSKCRNELNAAADTKDLPRDPDPDVMTLWGFYKDAQKREEIKQKIKETNKTKENDGEGSRDDSLLQAHTQDNFKCERCGKMFQSYQALCGHKAYCKSDNNGDLIDQKPFQCPYCNRVLKSAQALGGHKRVHFSSRS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1442 211 SUPERFAMILY beta-beta-alpha zinc fingers 147 206 IPR036236 -
Mal7g1442 211 ProSitePatterns Zinc finger C2H2 type domain signature. 186 206 IPR013087 -
Mal7g1442 211 ProSiteProfiles Zinc finger C2H2 type domain profile. 184 211 IPR013087 -
Mal7g1442 211 SMART c2h2final6 184 206 IPR013087 -
Mal7g1442 211 SMART c2h2final6 148 168 IPR013087 -
Mal7g1442 211 ProSiteProfiles Zinc finger C2H2 type domain profile. 148 167 IPR013087 -
Mal7g1442 211 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 209 IPR044303 GO:0006355
Mal7g1442 211 Pfam C2H2-type zinc finger 148 170 - -
Mal7g1442 211 Pfam C2H2-type zinc finger 184 206 - -
Mal7g1442 211 MobiDBLite consensus disorder prediction 120 139 - -
Mal7g1442 211 MobiDBLite consensus disorder prediction 1 97 - -
Mal7g1442 211 MobiDBLite consensus disorder prediction 120 140 - -
Mal7g1442 211 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 209 - -
Mal7g1442 211 Gene3D Classic Zinc Finger 145 206 - -
Mal7g1442 211 MobiDBLite consensus disorder prediction 69 97 - -
Mal7g1442 211 MobiDBLite consensus disorder prediction 16 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1442 Mal-Chr7 45312073 45312708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1442 141 206 C2H2 Transcription Factor Family AT3G60580 41.975 1.28e-14 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g1442 zf-C2H2_6 8.5e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1442 - - cam:101511854 212.231