Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1395 ATGAACCATCAAGACCAAATTATGCTTATGTCTCAGTTATTCCCCGCTAGTCAATACACCCAAGTAATTTCTCAACAAGGGGAGAAAAAACCAAGACGCAAGCGTAGTAAGAAGAAGAAAAGTGGAGAAAACGGTGCTAATGAAATGAACAAAAAGAGGAAACTGAGTGAAAAACAAGTGAATATTTTGGAGCAAAATTTTGGAAATGAACACAAACTTGACTCGGAGAGGAAGGATAAGCTTGCAATGGAGCTTGGTTTGGATCCTAGACAAGTTGCTGTTTGGTTTCAGAATCGAAGAGCTAGGTGGAAGAACAGAAAACTTGAAGAAGAGTACTCAATTCTTAAAAAATTCCATGAATCCACCATGCTTGAGAAGTGTCTCTTGGAAACCGAGGTACTGAAGCTAAGAGAGCAGCTTTCAGAGGCTAAGAAGGAAATCCAACGGCTTCGAGAGCCAACTGAAGGAGTCACAAGCAATAACTCAATTACTTCATCAATGTCACAATCAATGGAAGTGGCGGAGCCTCCATTTTTTGGTGAATTTGAAGTTGATGGATATGATGATCATGTGTTTTTCGTGCCTGAGGAATCATATTACTTCAATGGCATGGAATGGATTGACTGTACATCTAACATATAA 642 0.3941 MNHQDQIMLMSQLFPASQYTQVISQQGEKKPRRKRSKKKKSGENGANEMNKKRKLSEKQVNILEQNFGNEHKLDSERKDKLAMELGLDPRQVAVWFQNRRARWKNRKLEEEYSILKKFHESTMLEKCLLETEVLKLREQLSEAKKEIQRLREPTEGVTSNNSITSSMSQSMEVAEPPFFGEFEVDGYDDHVFFVPEESYYFNGMEWIDCTSNI* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1395 213 ProSiteProfiles 'Homeobox' domain profile. 46 106 IPR001356 GO:0003677
Mal7g1395 213 CDD homeodomain 51 107 IPR001356 GO:0003677
Mal7g1395 213 SUPERFAMILY Homeodomain-like 50 115 IPR009057 -
Mal7g1395 213 MobiDBLite consensus disorder prediction 21 58 - -
Mal7g1395 213 MobiDBLite consensus disorder prediction 41 58 - -
Mal7g1395 213 SMART HOX_1 49 110 IPR001356 GO:0003677
Mal7g1395 213 PRINTS Lambda-repressor HTH signature 86 102 IPR000047 GO:0003677
Mal7g1395 213 PRINTS Lambda-repressor HTH signature 77 86 IPR000047 GO:0003677
Mal7g1395 213 Pfam Homeodomain 51 105 IPR001356 GO:0003677
Mal7g1395 213 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE 3 208 - -
Mal7g1395 213 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 3 208 IPR045224 GO:0003700
Mal7g1395 213 ProSitePatterns 'Homeobox' domain signature. 81 104 IPR017970 GO:0000981|GO:0006355
Mal7g1395 213 Coils Coil 46 66 - -
Mal7g1395 213 Gene3D - 42 114 - -
Mal7g1395 213 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1395 Mal-Chr7 43513435 43515115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1395 1 207 Homeobox Transcription Factor Family AT4G36740 52.778 8.10e-67 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mal7g1395 Homeodomain 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1395 K09338 - gmx:100810736 296.589