Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1363 ATGGGTTGGTTTACAAAGTTTCTGAATGGCTCTAATCATAGAATTTCAAGAGGGCAATACAATGGCAAACATGGTGATGATAGAATTTGGGATAATCATCATACTTCAGTGGATGATTTGACGGATGCCGAAAAAGAAGATATCGACCGTGCAATTGCACTCTCTCTATCAGAGGAGGATTTGAAAGGGAAGAAAGTTGTTGAGGATGACTCTCAGTCTGAAGAAGACGAACAACTTTGTAAAATTGATGAGGAAGATGAGAATGTTGGTAAAGTTCGACAAGATGAAGATGAACTTCTAGCTAATACTCAGCAGGCTGAAAATGAACGCCGTGCCAAAGATCAACTTGAGGAAGACGAGCAACTTGCAAGGGCAATTCAATTAAGTTTGAGCACTGGTTCTCCTCCTCGACATGGCAAAGATTCTTTATCTCAACCTTCTCCCCACCTCTTTCCACCAGGATTCAGAATCTGTGCTGGATGCAATGCTGAGATTGGCCATGGAAGATTTTTAAGTTGCATTGGAGGGGTCTGGCATCCACAATGCTTCCAATGCCATGGTTGCCATCTGCCAATCACTGATTATGAGTTTTCCATGTCTAGCAACCGTCCTTACCATAAATCCTGCTACAGGGAGAAGCATCACCCAAGATGTGATGTTTGCAAGAATTTTATCCCGGCTAATTCAGCTGGACTTATTGAGTATAGAGCTCATCCTTTCTGGATACAAAAGTACTGCCCAGCGCATGAGCTTGACGGCACTCCTCGTTGTTGTAGCTGCGAAAGAATGGAGCCAAAGGATTCAAAATATCTTTTGCTTGATGATGGTCGAAAGCTATGTCTCGAGTGTCTAGACTCAGCAATTATGGACAGTCATGAATGCCAACCTCTCTACCTTGAAATACTAGAATTTTATGAAGGTTTAAATATGAAAGTGGAGCAGCAAGTTCCTATGCTTTTGGTCGAGAGACAAGCACTGAATGAGGCCATGGAGGGAGAAAAGAATGGTCACCACCATTTACCTGAAACTAGAGGACTCTGCTTGTCAGAAGAACAAACCGTCACCACCATTTTAAGAAAACCAAGTATAGGGGCAGGACACCGAGTCACAGACATGATAACCAAGCCTTTTAGACTGACCCGTCGATGTGAAGTGACAGCCATTCTTGTTTTGTATGGCCTTCCTAGGTTGTTGACAGGATCAATCCTAGCTCATGAGATAATGCATGCATGGCTCAGGCTTAAAGGTTATCCCAACCTGAGTCCAGAAGTTGAAGAAGGAATCTGTCAAGTCTTGGCTCATATGTGGTTAGAATCAGAGCTCTATTCTGGATCTGGGAATAATGATGCATCGTCTTCGTCTTCATCATCGTCAATGCCGCTGTCTTCTTCTGCATCATCGAAGAAGGGTAAACGGTCTGATTTTGAGAAGAAACTTGGCGAGTTTTTCAAAAACCAGATTGAGTCAGATACCTCATCAGCTTATGGAGATGGATTCAGATTGGGTAACCAGGCAGTCCTTAAGTATGGACTCAAAAGTACCCTTGATCATATCCATTTGACCGGAACTTTTCCGTGTTGA 1581 0.4301 MGWFTKFLNGSNHRISRGQYNGKHGDDRIWDNHHTSVDDLTDAEKEDIDRAIALSLSEEDLKGKKVVEDDSQSEEDEQLCKIDEEDENVGKVRQDEDELLANTQQAENERRAKDQLEEDEQLARAIQLSLSTGSPPRHGKDSLSQPSPHLFPPGFRICAGCNAEIGHGRFLSCIGGVWHPQCFQCHGCHLPITDYEFSMSSNRPYHKSCYREKHHPRCDVCKNFIPANSAGLIEYRAHPFWIQKYCPAHELDGTPRCCSCERMEPKDSKYLLLDDGRKLCLECLDSAIMDSHECQPLYLEILEFYEGLNMKVEQQVPMLLVERQALNEAMEGEKNGHHHLPETRGLCLSEEQTVTTILRKPSIGAGHRVTDMITKPFRLTRRCEVTAILVLYGLPRLLTGSILAHEIMHAWLRLKGYPNLSPEVEEGICQVLAHMWLESELYSGSGNNDASSSSSSSSMPLSSSASSKKGKRSDFEKKLGEFFKNQIESDTSSAYGDGFRLGNQAVLKYGLKSTLDHIHLTGTFPC* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1363 526 SMART uim 43 62 IPR003903 -
Mal7g1363 526 SMART uim 117 136 IPR003903 -
Mal7g1363 526 PANTHER PROTEIN DA1-RELATED 2 1 525 IPR045218 -
Mal7g1363 526 SMART lim_4 157 209 IPR001781 -
Mal7g1363 526 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 150 183 - -
Mal7g1363 526 CDD LIM_DA1 158 210 - -
Mal7g1363 526 Pfam Protein DA1 307 520 IPR022087 -
Mal7g1363 526 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 184 239 - -
Mal7g1363 526 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 1 525 - -
Mal7g1363 526 Gene3D Cysteine Rich Protein 153 216 - -
Mal7g1363 526 ProSiteProfiles LIM domain profile. 156 216 IPR001781 -
Mal7g1363 526 Coils Coil 99 126 - -
Mal7g1363 526 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 117 136 IPR003903 -
Mal7g1363 526 MobiDBLite consensus disorder prediction 447 472 - -
Mal7g1363 526 ProSitePatterns LIM zinc-binding domain signature. 158 192 IPR001781 -
Mal7g1363 526 MobiDBLite consensus disorder prediction 447 468 - -
Mal7g1363 526 Pfam LIM domain 158 213 IPR001781 -
Mal7g1363 526 MobiDBLite consensus disorder prediction 63 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1363 Mal-Chr7 42795128 42799486 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal7g1363 DA1-like 4e-104 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1363 - - gmx:100817969 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1363 7 42795128 42799486 Mal5g3505 5 100551155 100554459 PCT