Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1360 ATGCAAGGGTTAGAGATAGAAAGGCGAGATGACGGGACACAAAATGTTTGTGATTTGTTGACTAATTCGAATTGTCAATGCAATGGAGCTTCATGCTGTGACTGTCAAGGGGAAGACCAAAAAGATTATGGCGGTTTCCATGATTTTGATGAAGACATGATAAGTGAACGTTACTTAACCTCTGAGAATTCTCTCTCTGTTGTTGATACAATTGAAAGTGACTCACCAAATAACATCAGGGAAGGAGACTTGGCTTTTAATGAACCCAAGTGGCTAGAGGGGGATGCATCTGTCGCATTGTGGGTCAAGTGGAGAGGAAAGTGGCTGGCTGGTATCCGATGTGCAAGGGCTGACTGGCCGTTATCAACTCTGAGAGCAAAACCAACTCATGACCGAAAGAAATATTTTGTCATATTTTTTCCGCACACAAAGATTTATTCTTGGGCAGATATGCTGCTTGTTAGGTCAATTAATGATTATCCGCATCCTGTTGCATACAAGACTCATCAAGTAGGACTGAAATTGGTAAAGGACTTAACAGCTGCACGGCGGTTTATAATGCAAAAGCTAGTTGTTGGCATGTTGAACATCGTTGATCAGTTTCATCTTAATGCTTTGACAGAAACTGCCCGTGATGTGAAAGTCTGGAAGGCATTCGCCATGGAGGCTTCTCGTTGTAATGATTATTCTGATTTTGGAAGAATGCTTCAAAGGATACACAATAGCATCCTGGGGCACTACATAAGTGCTGACTGGTTACAGCATTCTTCTCAATCTTGGGTTGAACGATGTCAGAGTACAAATAGTGCTGAATCGGTAGAACTTCTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGACGTCAACAATCTCTGGAACTCACCAGTTCAACCAATATTAGGTTCTGAATGGAAAACCTGGAAGCATGATATAGTGAAATGGTTCACGCCATCACCTCCCTTATCTAGCAGCAAAGAGACTCCTCGACAGATTTCTCTTGATCCATACCAAACAAACCTTCAGGCATCTAGAAAAAGGCCTAAACTTGAAGTTCGCCGGGCAGATACACATGCTTCAAAAGTGGAATTCAAAGGTTCAGATCACACTATTGCTCTTGTGAATGACCCTGGTTTCTTTAAGAATCAGGAGACATTGAGAACATTAGAAGCTGAGACTTGTAAGCCTGAAAATATTAGGAAGGTCTCTATCACAAATGATCTGTCCAGTAATTTGACCAATAAATGGAATGAAATTGTAGTTGAGGCTGCTGATTCTAGTTTCATGCATACCAAAGAAAATGAATCAACACCTATAAATGAAATGGCTGGTGTAAAATCTTTGGAGCCTGGTAGTAAGAATCGACAATGTTTAGCTTTTATTGAAGCTAAGGGAAGACAGTGTGTAAGATGGGCAAATGAGGGAGATGTATACTGTTGTGTGCATTTGTCTTCTCGTTTTATGGCCGGCTCAGCAAACGCCGAAAATCCGGGTCAAATTGATACTCCTATGTGTGATGGTACAACTGTTGTGGGTACTAAATGTAAGCATCGGGCGCTACCTGGATCTTTATACTGTAAAAAACACCGACCTTATACTGAAACCGAACAGATGTCAAGTTTACCCCGAAGTACTATAAAAAGGAAGCATGAAGAAAATTATGGTTCAGAGAACATGTTCTGCAAAGACATGGTATTGGTAAATGTTGAAGCTCCACTGCAACTGGTTCCAGTGCCATCCATTGCTGGTGATTCATTACATGGAGAAAGCAACTTGTTTGAAAAGGGTCATGTTGCAACAGAGGCTCTGAGCTGTATAGGTTCTCCTCCATTTGATAATAAGAATCCTTGTAGGGAAGCTCCTAAGCGCTATTCCTTGTACTGCGAAATCCACCTTCCAAGCTGGCTTAAACGAGCAAGAAACGGGAAGAGTAGAATTGTATCAAAAGAAGTGTTCTCAGAACTATTGAGGGGCTGCAGCTCGTGGGAGCAAAAGGTACATCTGCATGAAGCATGTGAGCTTTTTTATAGGCTATTCAAAAGCATTTTATCACTAAGAAACCAAGTTCCTAAGGATGTTCAATTCCAATGGGCTTTGACTGAAGCCTCCAAAGTTACTGGTGTTGGAGAATTTTTTACAAAGTTGGTTCTTAGTGAAAAAGAGAGAATCAAATTGATGTGGCGATTCAATGATGACATGGATGTACCCTCTGTAATAGAAGAACAACAACCTCTCTTGCTCATGCCACCCCCAATTAATCATAGCTTCGATAATGAAAATGACATTAAATGTAAGATATGCTCCACACAATTTCCTGATGACCAAGCACTCGGTAACCATTGGATGGACAGTCATAAAAAGGAAGCACAGTGGCTGTTTAGAGGCTATGCGTGTGCCATTTGTCTGGATTCTTTTACTAACAAGAAACTATTGGAATCCCATGTTCAGGAGAGACATCATGTGCCATTTGTCGAACAGTGCATGCTTCTCCAATGCATTCCTTGTGGGAGTCATTTTGGAAGTTCTGAACAGTTATGGCAGCATGTTGTATCAGCTCATCACGTTGATTTTAAGCCATCAAAAGCTAATGAGCAGCAAGCTTTCTCTACTGGCGAAGGTTCGGTGGTAAAGCATGACCAGGGAAATTCTGCCTCTTTGGAAAATAAATCCAAGAATCCAGGTTGTCCACGGAGGTTAGTTTGCAGGTTTTGTGGGTTGAAATTTGATTTACTACCTGACCTAGGTAGACATCACCAAGCTGCTCATATGGGGCCCAATCTGGTTAGCAACCGTCCCGCTAAGAGGGGAGTTCGCTATTATGCATATAAATTAAAATCTGGCAGACTAAGCCGCCCTAAATTTAAAAAAGGTTTGGCAGCAGCCGCATCATTGAGGATGAGAAATAAAGCTAATGCCAATTTAAAGCGATGCATTCAGGCATCAAAGTCAATTGGCCTGGAAGGAACAACAACCATGCAGCCTCATGTAACAGAAACACCAGATATTAGCGGATTGACAGAAAATCAATGCTCAGCTGTTGCCAAAATTTTGTTTTCAGAAATTCAGAAAACTAAACCTCGGCCTAACAATCTTGATATTTTATCAGTTGCTCGCTTTGCTTGCTGCAAAGTTAATCTTGTAGCCTCACTGGAAGAGAAATTTGGAGTTATGCCTGAAAAGCTCTATTTAAAGGCAGCAAAACTTTGCAGCGAGCGTAATGTTGTTGCGAAATGGCACCATGAGGGGTTTGTTTGTCCGAAAGGTTGTAACTTGTTGAAGGATCAAGCCTTGCACTCTCCTTTAGCATCTCTTCCTAATGGTTTTGTAATACCAAAATCTGTAAATTTGTCCGAACCTGCGAGTGATGAGTGGGAGGTCGATGAGTTTCACTGCATAATCAATTCACCAAGTTTACAATTAGGTTCACGGAAAAGGGCTATAGTATTGTGTGATGATATTAGCTTTGGGAAGGAATCAGTTCCTGTTATTTGTGTTGTAGATCAAGAACTTCTACATTCTCTAAATGCGCATGGATCTAATAAACAAGATATAATCTCTTCTAAACCTTGGGAGAGCTTCTCCTATGTTACAAAGCCAATAATTGATCAATCCCTTACTCTTGATTCAGAGAGTCCGCAATTGGGATGTGCCTGCTCATATTCATCGTGCTGTCCTGAAACATGTGATCATGTATACCTTTTTGGTGATGACTATGCAGATGCAAAAGACAGATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATCATAACGGTCGATTAATATTGGAGGAAGGTTACCTTGTCTATGAATGTAACCATATGTGCAGATGCAATAAATCCTGTCCAAACAGAATATTGCAGAATGGAGTACGAGTCAAATTGGAGGTCTTTAAGACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGCGAAGCTATTCTGCGTGGAACATTTGTGTGTGAGTACATAGGAGAAGTTTTAGACGTGCAGGAGGCACACAACAGGCGCAACAGAAATGGCACAGGGAATTGCAGCTATTTCTATGACATCAATGCTCGTGTTAATGATATGAGCAGATTGATTGAAGAACAGGCTCAATATGTGATTGATGCTACTAAAAATGGAAATGTGTCGAGGTTCATCAATCATAGCTGCTCGCCCAATCTTGTCAGTCACCAAGTTCTCATAGAGAGCATGGATTGTGAGCGTTCACACATTGGTTTTTATGCAAGTCGAGACATCGCTCTGGGTGAAGAGCTGACATATGGATTTCAGTATGAGCTTGTGCCTGGTGAAGGATCTCCATGTTTGTGTGAATCATCAAAATGTAGGGGACGCCTCTACTAG 4347 0.4134 MQGLEIERRDDGTQNVCDLLTNSNCQCNGASCCDCQGEDQKDYGGFHDFDEDMISERYLTSENSLSVVDTIESDSPNNIREGDLAFNEPKWLEGDASVALWVKWRGKWLAGIRCARADWPLSTLRAKPTHDRKKYFVIFFPHTKIYSWADMLLVRSINDYPHPVAYKTHQVGLKLVKDLTAARRFIMQKLVVGMLNIVDQFHLNALTETARDVKVWKAFAMEASRCNDYSDFGRMLQRIHNSILGHYISADWLQHSSQSWVERCQSTNSAESVELLKEELFDSILWNDVNNLWNSPVQPILGSEWKTWKHDIVKWFTPSPPLSSSKETPRQISLDPYQTNLQASRKRPKLEVRRADTHASKVEFKGSDHTIALVNDPGFFKNQETLRTLEAETCKPENIRKVSITNDLSSNLTNKWNEIVVEAADSSFMHTKENESTPINEMAGVKSLEPGSKNRQCLAFIEAKGRQCVRWANEGDVYCCVHLSSRFMAGSANAENPGQIDTPMCDGTTVVGTKCKHRALPGSLYCKKHRPYTETEQMSSLPRSTIKRKHEENYGSENMFCKDMVLVNVEAPLQLVPVPSIAGDSLHGESNLFEKGHVATEALSCIGSPPFDNKNPCREAPKRYSLYCEIHLPSWLKRARNGKSRIVSKEVFSELLRGCSSWEQKVHLHEACELFYRLFKSILSLRNQVPKDVQFQWALTEASKVTGVGEFFTKLVLSEKERIKLMWRFNDDMDVPSVIEEQQPLLLMPPPINHSFDNENDIKCKICSTQFPDDQALGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLESHVQERHHVPFVEQCMLLQCIPCGSHFGSSEQLWQHVVSAHHVDFKPSKANEQQAFSTGEGSVVKHDQGNSASLENKSKNPGCPRRLVCRFCGLKFDLLPDLGRHHQAAHMGPNLVSNRPAKRGVRYYAYKLKSGRLSRPKFKKGLAAAASLRMRNKANANLKRCIQASKSIGLEGTTTMQPHVTETPDISGLTENQCSAVAKILFSEIQKTKPRPNNLDILSVARFACCKVNLVASLEEKFGVMPEKLYLKAAKLCSERNVVAKWHHEGFVCPKGCNLLKDQALHSPLASLPNGFVIPKSVNLSEPASDEWEVDEFHCIINSPSLQLGSRKRAIVLCDDISFGKESVPVICVVDQELLHSLNAHGSNKQDIISSKPWESFSYVTKPIIDQSLTLDSESPQLGCACSYSSCCPETCDHVYLFGDDYADAKDRFGKPMRGRFPYDHNGRLILEEGYLVYECNHMCRCNKSCPNRILQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVQEAHNRRNRNGTGNCSYFYDINARVNDMSRLIEEQAQYVIDATKNGNVSRFINHSCSPNLVSHQVLIESMDCERSHIGFYASRDIALGEELTYGFQYELVPGEGSPCLCESSKCRGRLY* 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1360 1448 ProSitePatterns Zinc finger C2H2 type domain signature. 901 922 IPR013087 -
Mal7g1360 1448 ProSitePatterns Zinc finger C2H2 type domain signature. 832 854 IPR013087 -
Mal7g1360 1448 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 7 1448 - -
Mal7g1360 1448 Pfam SET domain 1304 1422 IPR001214 GO:0005515
Mal7g1360 1448 ProSiteProfiles Zinc finger C2H2 type domain profile. 899 927 IPR013087 -
Mal7g1360 1448 SMART c2h2final6 899 922 IPR013087 -
Mal7g1360 1448 SMART c2h2final6 830 853 IPR013087 -
Mal7g1360 1448 SMART c2h2final6 762 785 IPR013087 -
Mal7g1360 1448 SMART c2h2final6 796 819 IPR013087 -
Mal7g1360 1448 ProSiteProfiles Zinc finger C2H2 type domain profile. 796 819 IPR013087 -
Mal7g1360 1448 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 7 1448 - -
Mal7g1360 1448 ProSiteProfiles Pre-SET domain profile. 1214 1290 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal7g1360 1448 Gene3D SET domain 1142 1448 IPR046341 -
Mal7g1360 1448 SMART set_7 1293 1431 IPR001214 GO:0005515
Mal7g1360 1448 Pfam Zinc finger C2H2-type, 3 repeats 798 923 IPR040689 -
Mal7g1360 1448 SMART preset_2 1150 1277 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal7g1360 1448 MobiDBLite consensus disorder prediction 868 890 - -
Mal7g1360 1448 SUPERFAMILY SET domain 1144 1438 IPR046341 -
Mal7g1360 1448 ProSiteProfiles Zinc finger C2H2 type domain profile. 830 859 IPR013087 -
Mal7g1360 1448 ProSitePatterns Zinc finger C2H2 type domain signature. 764 785 IPR013087 -
Mal7g1360 1448 Gene3D Classic Zinc Finger 757 826 - -
Mal7g1360 1448 Pfam Pre-SET motif 1153 1285 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal7g1360 1448 ProSiteProfiles Post-SET domain profile. 1432 1448 IPR003616 -
Mal7g1360 1448 ProSiteProfiles SET domain profile. 1293 1425 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1360 Mal-Chr7 42735239 42742629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1360 81 1447 C2H2 Transcription Factor Family AT2G23740 51.084 0.0 1364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g1360 Pre-SET 4.9e-15 No_clan