Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1318 ATGGAACAACAACTGAACTTAGATTTGACTTTAGCATCTGTTCCAAAAACTGTTTCTCATTTCCTTAACAACGTTGTTCAGACCAAAGACATGTCTCAGAAACTTTCAATGTTTGATGATTTGGTTCATAGCTTGGAAGAAGAAATGAAGAAAGTGCTTGCTTTCAAACGTGAACTACCTCTTTGCTTACTCCTCCTTAATGATGCTATAGCAAGATTAAAGGAGGAAAAAGAAAAACTTGGGTTAGTGGAAATGAAAGAAAACTGTGATAATAAGAAGAATTGGATGAGTTCAGTTCAGCTATGGACTAATGAAACAAAATCGAAGAATGAAGGTGATGATGATAGGATTGTGTTACAGAAGGGTGATGGTGGAGGGGTATTTGTGGGATTTAATGAAAATTTGTTGAAGGAAGTTTCACAAGCTAAGAGCTTTAGTTTGGTGTCTGAAGTGAGTCATGGAAATTCTAAGAGTGGTGGTGGAAGTTCTGGATCGTCTTTGTTGCGTGTTGAGATACAGAATCAACCTCAGCCGCCGCAACCTTTGCAGCAGAGTTCGAGGAAACAGAGGCGATGCTGGTCGTCGGAGCTTCATCGCCGTTTTGTTGATGCACTTCAACAGCTTGGTGGAGCACATGCAGCCACTCCTAAACAAATTAGGGAAAAGATGCAAGTGGATGGATTAACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTACAGGCTTCATGTTAGAAGATTCCCAGTTTCTTCAATTGAGGAAGCTAATAAGCTAGCCTTATATATGACTCAAGATCAATGTCAAGATACATTCAAGGGAAATTTATCAGAGTCTGTTTCACCACAGGGTCCTCTTACTCCTCTTCTCCTTGGAGGATCTGTTAAAGGTCTCTCAAGCCATGGAAGAAACAGTATGGATGCAGAGGATGAGCAATCAGATTGCAGGAATTGGAAAAGTGATCAGGAGCAGCATCATGAATCTGACTGA 987 0.4022 MEQQLNLDLTLASVPKTVSHFLNNVVQTKDMSQKLSMFDDLVHSLEEEMKKVLAFKRELPLCLLLLNDAIARLKEEKEKLGLVEMKENCDNKKNWMSSVQLWTNETKSKNEGDDDRIVLQKGDGGGVFVGFNENLLKEVSQAKSFSLVSEVSHGNSKSGGGSSGSSLLRVEIQNQPQPPQPLQQSSRKQRRCWSSELHRRFVDALQQLGGAHAATPKQIREKMQVDGLTNDEVKSHLQKYRLHVRRFPVSSIEEANKLALYMTQDQCQDTFKGNLSESVSPQGPLTPLLLGGSVKGLSSHGRNSMDAEDEQSDCRNWKSDQEQHHESD* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1318 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 324 IPR044787 GO:0003700|GO:0006355
Mal7g1318 328 Gene3D - 187 244 - -
Mal7g1318 328 SUPERFAMILY Homeodomain-like 186 246 IPR009057 -
Mal7g1318 328 MobiDBLite consensus disorder prediction 272 328 - -
Mal7g1318 328 Coils Coil 66 86 - -
Mal7g1318 328 Pfam Myb-like DNA-binding domain 190 241 IPR001005 -
Mal7g1318 328 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 3 324 - -
Mal7g1318 328 MobiDBLite consensus disorder prediction 302 328 - -
Mal7g1318 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 185 245 IPR017930 -
Mal7g1318 328 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 188 243 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1318 Mal-Chr7 42263071 42264721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1318 5 238 G2-like Transcription Factor Family AT4G37180 42.857 7.55e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal7g1318 Myb_DNA-binding 7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1318 - - pvu:PHAVU_002G021400g 318.931