Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1316 ATGTCGTCATCATCAAATTCACCGTGTGCGGCGTGCAAGTTTCTCCGGCGAAAATGCACTCAAGAGTGTGTTTTTGCACCGTATTTTCCACCTGACAATCCTCAAAGATTTGCATATGTACACAAAGTGTTTGGAGCTAGTAACGTGGCAAAGCTGTTAAACGAGCTTAATGCGGCGCAGCGTGATGACGCGGTTAAGTCGTTGGCTTATGAGGCCGAGGCGCGGCTGAGGGATCCGGTTTACGGCTGCGTTGGTCTTATTTCACTTCTTCAGCATAAGCTGAGAGCTATTCAAGGTGAACTCAACAGTGCTAAAAAGGAATTAGCTACTTATATTGGTCCTCAGGCGCTTCAAGGTATTCCCACGACGATTCTTCAGCAGCAACAACAGCAGCAGCATAATAACCCTTTTGGTAATTCTCTTTACCCTTATAATGGTGGTGTACCCGCGGTTACCGCGGGTGCACAGATGGTGATTCGTGACCCTCAACAGCCACCTGTGGTTGCTCAAAATCAGATCTTTGAAGCTCAGCAATTGGCTGCTGCTGCTGCTGCTAGAGAGCAACAAGAGATTTTTAGGACTTTTGAGAATCAACAACAGCAGCAACAACAGCAAGAGTTTTTGAGGTTTAGTGGTGGGTTTGATGTGGATTCAGTTTCTAATTCTGCTGTTGGTGGTGGTGGGTTCAACCAAGTTTCCCCAGTTTCTGCTTCTGGTGTTGGTGTTGGTGGTGTTGTTGTTGCTGATCAATTGTCTCCTTCTTTAGCTTTGGGATCTTTTGATAATACTACTTATCATCACATGCAACAAGCACAACAAGTACAAGGAGGAGAATCTCATAATCTTCATCATCATAATCATAATCATAATCATCATCTTCCACTTCAGGCACAGTTATTGCTCCCTCCACAACAGAAGCAAGCACAGCCACAAACTCAGACGGAAAGCGAGGAGTGTAGGAGTGTTGGACTTGGTCCTTCTTGTTGA 987 0.4539 MSSSSNSPCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISLLQHKLRAIQGELNSAKKELATYIGPQALQGIPTTILQQQQQQQHNNPFGNSLYPYNGGVPAVTAGAQMVIRDPQQPPVVAQNQIFEAQQLAAAAAAREQQEIFRTFENQQQQQQQQEFLRFSGGFDVDSVSNSAVGGGGFNQVSPVSASGVGVGGVVVADQLSPSLALGSFDNTTYHHMQQAQQVQGGESHNLHHHNHNHNHHLPLQAQLLLPPQQKQAQPQTQTESEECRSVGLGPSC* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1316 328 Coils Coil 87 107 - -
Mal7g1316 328 MobiDBLite consensus disorder prediction 303 320 - -
Mal7g1316 328 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-RELATED 3 277 - -
Mal7g1316 328 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Mal7g1316 328 MobiDBLite consensus disorder prediction 303 328 - -
Mal7g1316 328 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 277 - -
Mal7g1316 328 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1316 Mal-Chr7 42199735 42200721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1316 3 266 AS2 family AT5G66870 51.064 2.01e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal7g1316 LOB 3.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1316 - - mtr:MTR_5g017950 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1316 7 42199735 42200721 Mal5g3563 5 101633662 101634609 PCT
Mal5g3562 5 101608411 101609094 Mal7g1316 7 42199735 42200721 PCT