Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1225 ATGAAGAGGTTGAGGTCAAGCGAAGATCTTCACTCGTACAACGGTGAAAAGAACGGTGGTGATAAGAATGGTGTGAAGGATTCATCAAATCTGAACCGTTCGTTTTCATCTACTGGTCAAAGAAGTTTTTACTACAAACAGGAGAATGTGCGGAAGAGTTTAATTTCGTCGTCTTCGTCGTCGTCGCGATACGAAAGGGATCGAACGGTGGAGGAGGATCGGGAGGGTTCTAGATTGGTGAGGAAAAGATCTGAGCATGATTTTGATGGGTTTGATCGGAGGAAGGGATTTGATCGGGATCGGTATAGCCGGGACAGCCGGGATGGTGCTTACAGTGGAGGTGCAGATAGGAATAGTGGTGGTGGAGAAAGGATTGGTGGGGGTGGAGATAGAAATAGTGGGGGTGGAGATAGGAATTTGATTCATAGGTCGGAGAGTTTTTGTGGAGGTTCGAGGAGGGAGTTTCCGAAGGGGTTTCGATCGGAGAGGGATCGATCAAGGAGGGAGGGGAGTGTGTCCTCGTGGAGGAGAGGGTTGAAGGATTTTGATGAGAGTAGTAGAGGGAGTGGTAGTAGGGTTGAGGAGAGGGTGGTTAGGTCGCCAAAGGGTTTTTCGAGGGATGTGAAATCACCTAGTTGGTCGAAGGATTCGGAGAGTGAACAGTCGAAGAAGAGATCTTCGGAGTCTCCGAGGGTGTTTCGAGAGGTTAAGTCCAAATCTAAGTCACCGTCTGTGTCTAAGGATTCGGAGAGTGAGCAATCGAAGAGTGTTAGTGGTGTTGAGGTGAAGAAAAGTGAAGAGTTGGTGCAGCAGGTTCAGAGTGGAAGTGGTAGTGAAATGGAAGAGGGGGAACTCGAACCTGAACCCGTCCCTAAAACTGAAGCCGAGACTGCTCCTAAAGATGAAGCAGTTGGAAGTGAAATCCAGCAAACCCCTGAGGACAAACAAGTTCACAAGAAGAAGAATGAACGTCGTTCAAGTGATGCAGATGTTGTTATGGAAGAAAAACAGATGTTGGCGAGTGACAAAGAGGCGAAACATATGGAAGATGTTGATTCTGAGGTAAAAGATGCTGAGAAGGAAGTTGATGAACTGCCTAAGACTCAAGATGATCCAACTAAGAAAATATCTGTTGCTGAGACTGAGATTGGAACTGCGAGTAATGAGGATGATAAGAACGATGTGTGTTTGAATGGGGATGATACTCGGTGCAAGGAGGAAACGGAGAAGGGAACAGATAAGGGGAAGGCATTGCTTAATGAAGAGGAGCATGAGGAGGACAAGGGTGTAGGTGGTTACAAACCTGAGTCAAATGAAGGCTCAACAGAGAATGAAGTTGCTGAAGAAGTGAAGGGAGAAACAATGATGGAGAGTGTGAGTGTGACCAACAATGCGAAGGATAAAGGCAAAAGCGTCTCGGTCACACCTGATGTTGCACATTCTTCAAAAGACGGCTTGTGGATTGATAGAGGGTCGAATGATCTCATAACATGCCCGGTAGATGACATGGAAGGTCCAAGCACAAGAGGGTTCGAGCTTTTTTCTAGTTCTCCTGTGAGAAAAGCAGAAAAATCTGATAGCTCGGTTCTAAAAAAGGAGAATGATGACAATCTTGCAATGGGGCAGCTTGACCTTTCTCTTAGCTTGCCAAATGTTCTATTACCGATTGGAGCCAAGGAGACAGCAACACAAGCTCCTGGATCTCCCAGTCAAGCACGGAGTGTTCAATCTCTAAGTAATACATTTTGTACCAACTCAGATGGTTTTACTGCATCAATGTCATTTTCAGGTTCCCAATCATTATATCACAATCCAAGTTGTTCGCTAACCAAAAATTCGGTGGACTATGAACAATCTGTTGGCAAATCGGTTGGCAGTCGCCCCTTGTTCCAGGGATTTGATTGGCAAGCCCTATCTCAGGGTGAGCCCAAGCAGAAAGAAGTTCCCTCTAGTCAGAGAACTTCGATGAATGGGAACGGCTCCCTTTACCAGCCTCAAGCATCATGGGGTATTTTAGATACTCAAGCTTTAAAAGGTCAACATTCTAGGGCTGTAGAAGGAAGCTCGAAAATGGGCAGCGGGCTCGAAAAGCAATTGAGTTTTCATAAGCAGCTTTCAGGACAGTCAAGACGACATGATGATGTTCGATCTCCTACACAGAGTGTTGGGTCTCATGACAATGGATCAAATTATAGTTTTGAAAAAAAGAGGGAGGTTAGGGAAAGGAGTAGTGGTAGTCTACATCGAACTACCAGCCAGAAGGGACAAGAACAACTTCTGATGGGTGGACTTGATTTTGTTAAGACAATCATTGCACGAATAATTTCTGAACCTGTGCACGCGATGTCCAGAAAGTTCCATGAAATGTCCGGACAGTACATGACACATATGAAAGAGGGTATTCGGGAATTCATGCTCAATGCAGATAGCCATGGACAGATACTTGCTTTTCAAAAAGTTTTGCAGAACAGGTCTGATATAACCTTGGATGTTCTAGTGAAGTGTCATCGAGTGCTACTGGAAATTTTGGTTGCATTAAAAACTGGTTTAGCCCATTATCTTCACCTAGGTGATAACATTTCATCAAATGATTTAGCTCAAGTTTTTCTAAACTTGAAGTGTAGGAATGTATCATGTCGAAGTCAGTTGCCGGTTGATGAATGTGATTGCAAGCTTTGTGCACAGAAGAATGGTTTTTGCAGGGAATGTATGTGTCTTGTGTGTTCTAAGTTTGACAATGCGTCGAACACAACTAGTTGGGTTGGGTGTGATGTTTGTCTTCACTGGTGTCATACTGACTGTGGATTACGGGAATCTTATATTAGAAATGGACATAGTACTACTGGAACAAAAGGGACGACTGAGATGCAGTTTCACTGCACTGCTTGTGACCACCCTTCTGAGATGTTTGGCTTTGTCAAAGAGGTGTTTCAAAATTTTGCAAAAGAGTGGTCAGCTGAATCACTTTGCAAGGAACTTGAATACGTGAAGAGGATCTTTTCTGCCAGCAAGGATATAAGAGGGAGACAGTTGCATGAGATTGCAAATCTAATGCTGCCGAGGTTGACAGTTAAGTCTAACTTTCCTGAGGTTCTGAGACACATCATGTCTTTCCTTTCTGATTGTGATTCTTCCAAATTAGCCATGACAACTAACTTCTCTGGGAAGGAACAAGTCAAAGAAAACAATGTGATAGCTGGGCCCAGCCAGGAAGCTGCTTGGCTGAAATCTATTTATTCAGATAAGGCACCTCTGTTGGAAAGACCTGCAAGCATCCTTCCAAGATTTGACCAGAATGATAAAAGGACAATGGTGCAGGAGTTGCAGATGAGTAGTGTCCAAAAGGACTTCTGTTTTGATGAATTGGACAGTGTAATAAAAATCAAACATGCAGAGGCCAAAATGTTCCAATCTCGTGCTGATGATGCTAGGAGAGAAGCTGAAGGGTTGAAACGCATTGCCCTTGCGAAAAAAGAGAAAATTGAAGAAGAGTATGCCAACCGAATCACCAAGTTACGGTTCGCTGAGACAGATGAAATGCGTAAGCAAAAGTTAGAAGAACTCCATGGGTTAGAGAGGGCACATCGGGAGTATTTGAACATGAAAATGAGAATGGAGTCAGACATTAAAGATCTGTTATCCAAAATGGAAGCTACTAAAATGAACCTTGCCATGTGA 3678 0.4402 MKRLRSSEDLHSYNGEKNGGDKNGVKDSSNLNRSFSSTGQRSFYYKQENVRKSLISSSSSSSRYERDRTVEEDREGSRLVRKRSEHDFDGFDRRKGFDRDRYSRDSRDGAYSGGADRNSGGGERIGGGGDRNSGGGDRNLIHRSESFCGGSRREFPKGFRSERDRSRREGSVSSWRRGLKDFDESSRGSGSRVEERVVRSPKGFSRDVKSPSWSKDSESEQSKKRSSESPRVFREVKSKSKSPSVSKDSESEQSKSVSGVEVKKSEELVQQVQSGSGSEMEEGELEPEPVPKTEAETAPKDEAVGSEIQQTPEDKQVHKKKNERRSSDADVVMEEKQMLASDKEAKHMEDVDSEVKDAEKEVDELPKTQDDPTKKISVAETEIGTASNEDDKNDVCLNGDDTRCKEETEKGTDKGKALLNEEEHEEDKGVGGYKPESNEGSTENEVAEEVKGETMMESVSVTNNAKDKGKSVSVTPDVAHSSKDGLWIDRGSNDLITCPVDDMEGPSTRGFELFSSSPVRKAEKSDSSVLKKENDDNLAMGQLDLSLSLPNVLLPIGAKETATQAPGSPSQARSVQSLSNTFCTNSDGFTASMSFSGSQSLYHNPSCSLTKNSVDYEQSVGKSVGSRPLFQGFDWQALSQGEPKQKEVPSSQRTSMNGNGSLYQPQASWGILDTQALKGQHSRAVEGSSKMGSGLEKQLSFHKQLSGQSRRHDDVRSPTQSVGSHDNGSNYSFEKKREVRERSSGSLHRTTSQKGQEQLLMGGLDFVKTIIARIISEPVHAMSRKFHEMSGQYMTHMKEGIREFMLNADSHGQILAFQKVLQNRSDITLDVLVKCHRVLLEILVALKTGLAHYLHLGDNISSNDLAQVFLNLKCRNVSCRSQLPVDECDCKLCAQKNGFCRECMCLVCSKFDNASNTTSWVGCDVCLHWCHTDCGLRESYIRNGHSTTGTKGTTEMQFHCTACDHPSEMFGFVKEVFQNFAKEWSAESLCKELEYVKRIFSASKDIRGRQLHEIANLMLPRLTVKSNFPEVLRHIMSFLSDCDSSKLAMTTNFSGKEQVKENNVIAGPSQEAAWLKSIYSDKAPLLERPASILPRFDQNDKRTMVQELQMSSVQKDFCFDELDSVIKIKHAEAKMFQSRADDARREAEGLKRIALAKKEKIEEEYANRITKLRFAETDEMRKQKLEELHGLERAHREYLNMKMRMESDIKDLLSKMEATKMNLAM* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1225 1225 MobiDBLite consensus disorder prediction 501 531 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 456 478 - -
Mal7g1225 1225 Coils Coil 1133 1164 - -
Mal7g1225 1225 Pfam Coiled-coil region of Oberon 1098 1213 IPR032535 -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 285 301 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 1 485 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 24 63 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 730 747 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 385 433 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 1 23 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 643 665 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 64 111 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 640 665 - -
Mal7g1225 1225 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1225 IPR004082 -
Mal7g1225 1225 PANTHER PROTEIN OBERON 4 1 1225 - -
Mal7g1225 1225 CDD PHD_OBE1_like 904 963 - -
Mal7g1225 1225 Coils Coil 1202 1222 - -
Mal7g1225 1225 Pfam PHD - plant homeodomain finger protein 874 997 IPR032881 -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 680 756 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 312 377 - -
Mal7g1225 1225 Coils Coil 348 368 - -
Mal7g1225 1225 MobiDBLite consensus disorder prediction 147 248 - -
Mal7g1225 1225 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 824 839 IPR004082 -
Mal7g1225 1225 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1159 1181 IPR004082 -
Mal7g1225 1225 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 865 886 IPR004082 -
Mal7g1225 1225 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 911 931 IPR004082 -
Mal7g1225 1225 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 984 1003 IPR004082 -
Mal7g1225 1225 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1120 1140 IPR004082 -
Mal7g1225 1225 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 785 807 IPR004082 -
Mal7g1225 1225 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 839 854 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1225 Mal-Chr7 39346715 39351805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1225 872 1022 PHD Gene Family AT5G57380 25.166 1.13e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1225 - - mtr:MTR_4g039650 2022.67