Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1216 ATGTTTATTCCTTATTCTTACATGGCAGTAGACACTAAAGGTAATGCTACCCATAAGTTTTTGAACAACCTCACCAACACCACAGAGGAAAGTAGTCTAAAAGTGCGCATTTCTAGACTATGGGACAATATTCATGTCTATAACAAAATTGAATTGATTAGTATAGATATGGTGTTGATTGATGAAGAGATCAATGCTAACACCAAATTCACTGAGGAAGACTATGATGATGGCAAGATCCCTCTCCATGTTTTTGAATTTATATGCTACAATCTTGATGAGACACTAAAAAGGTCTCTGCGTAACGCTCCAACCTCAAATCCAAATGTTGCAGTTATCACATCCGCTATAGTCAAGACATTTCAAGGTGATGTATGTCTTAACTCATCAAGTTCAACAAAGATTTATATCAATACAGACATCCCGGAAGCAACTCAACTCATTCAGTCATTCAAGAGTACCAATGATTTACAATCAACTGAAAATGCGGGTCTCGCAGGTTCTGTTGTCCTTTACAAACTAGACAAGACAAGGACTATATCTGAAATTTTAAGTTTGACAAAATCAGGGGATAAGGTGGATGTTGTGTTTAACTGTTTTGCAACTGTGACCGAGGTTTTGGATAAAAACGGATGGTGTTACGTCGAATGTCCTGAGTGTAGAAAGGGTGTTTCTTCCACTGAAACACATTTTAAATGTGAAAGTTGTAATGTAGACGTGGAATATCCCGTGACAAGGTATCGTTTGGAAGTTGGTGTCAAAGACTCTACATATTCTACTATATTTGTATTGTTTGATGAAGTTGTTGAACAAGTGTCCCAATTAAAATTGACTGATCTAACATCAATTTTAGAAAATGAAACTGGAGACAGTCCAATAATAGCTCAGCAGCTCCAAAAGATCGTTGGGTCCACATTTATATTCCAAAATAAGATGAAGACTTACTTTAAAAGTGGTGGAAGAGAAAGTTTCAAAGTGAGCAGAATTGTGGAACCGAAAGTGAAGTTTGAAAATGAGTCGGATGGTGTGGAGAAAAAAGAGATTGGATCAAATTTGGGAGCTGATAAGGACCATAAAGAAGTGGTTGATCAGGAAGTGGTGGAGGATGTCTTAGACGACTGA 1122 0.3717 MFIPYSYMAVDTKGNATHKFLNNLTNTTEESSLKVRISRLWDNIHVYNKIELISIDMVLIDEEINANTKFTEEDYDDGKIPLHVFEFICYNLDETLKRSLRNAPTSNPNVAVITSAIVKTFQGDVCLNSSSSTKIYINTDIPEATQLIQSFKSTNDLQSTENAGLAGSVVLYKLDKTRTISEILSLTKSGDKVDVVFNCFATVTEVLDKNGWCYVECPECRKGVSSTETHFKCESCNVDVEYPVTRYRLEVGVKDSTYSTIFVLFDEVVEQVSQLKLTDLTSILENETGDSPIIAQQLQKIVGSTFIFQNKMKTYFKSGGRESFKVSRIVEPKVKFENESDGVEKKEIGSNLGADKDHKEVVDQEVVEDVLDD* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1216 373 SUPERFAMILY Nucleic acid-binding proteins 177 336 IPR012340 -
Mal7g1216 373 SUPERFAMILY Nucleic acid-binding proteins 105 153 IPR012340 -
Mal7g1216 373 CDD RPA1_DBD_C 180 339 IPR013955 -
Mal7g1216 373 PANTHER REPLICATION FACTOR A 1, RFA1 96 346 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal7g1216 373 Gene3D - 167 343 IPR012340 -
Mal7g1216 373 Pfam Replication factor-A C terminal domain 197 332 IPR013955 -
Mal7g1216 373 Gene3D - 55 162 IPR012340 -
Mal7g1216 373 PANTHER BNAC01G35430D PROTEIN 96 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1216 Mal-Chr7 39146697 39149175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1216 107 309 Core DNA Replication Machinery Family AT5G08020 28.372 1.78e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1216 - - mtr:MTR_4g070090 218.779