Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1209 ATGGCATTTCACGTTGCTTGTCCAATTACATGTCGAAGAATCTGTTTCTGTTCGTTAGGGTTTCCGCGAGCGTTGAACGGAGCGAAGAACGGAACGAAGGATTTTCTCGATGAGGTTGCGGTGTTGGGAGATTTTCTTGGTGAAAATCGGAAGGAAGATGGAACGATCCAGGTTGTGGTGCCGAAGGTGGTGCCGCCGCCGATTGAAATTGTTCCGGTTAGCGGTGGTGGTGAATTGGTTGATGAATCTGCTTCCATGAAAGCTAAACGTGATGCTCTTCAGAGAAAAGGTGCTGCTGCTATGATTGCTGCTGAGGAGTATGCTAGGAAGTTTGAGTCTGGTGATGTTGTGGATACATCGGGAAATCTTAATGGAGAAGAACAGGGTCAATCCAATGTCAAGGTCTTTTGTCGAATGTGCAATCGTGTTGAGAACGAAGGAAGTGAGAAAGCGAAAAAGATGCTGTCGTGTAAAAGTTGTAGTAAGAAGTACCATAGGAGCTGCTTGAAAAGTTGGTCTAATAATAGAGATTTATTTCATTGGAGTTCGTGGACCTGTCGTGCTTGCCGAATTTGTGAGGCTTGCAGAAGGACTGGTGATCCAAGTAAGTTCATGTTCTGCAAAAGATGTGATGGTGCTTACCATTGTTACTGTCTGCAACCTCCTCATAAGAATGTTAGTACTGGGCCCTATTTGTGCCCAAAACACACAAAGTGTCACAGTTGCGCATCCAATGTCCCTGGAAATGGACTAAGTGTGAGGTGGTTTCTGGGATACACGTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGGAATTACTGTCCTGTTTGTCTCAAGGTTTACAGAGATTCAGAATCAACACCAATGGTTTGCTGTGATCATTGCCAACGCTGGGTGCATTGCCAGTGTGATAATATTAGTGATGAAAGATATCACCAATTTCAAGTGGATGGGAATCTGCAGTATACATGTCCTACTTGTCGTGGGGAATGTTATCAGGTCAAGAGTCTTGAGGATGCTGTTCAAGAGCTTTGGAGGAGAAAGAATATTGCTGATAAAGATTTAATTACCAGCTTGAGGGCCGCAGCTGGTTTACCAACACAAGAAGAAATATTTTCTATTTCACCATATTCTGACGATGAGGATAGTGGGCCTTTGAAGTTAAAGAGTGATTCTGCACGTTCTTTGAAGTTCTCTTTTAAGAATTTTTCCAATAACTCACCTATCAAGATGAATGATTATGGAAAGAAATCTTCAAACAAAAAGACTGCTAAGAAAAAGGACTCTCTGTCATTCATGTCTGGTAAAATGGATGCACACCATAGTTTTGAAGGACATAGTGATATTAGATCTTTACATAGTTTGGATGATATGCAATCCCAGAGAAATGAACGTCCTGATGTTTATTCATCACCTGCTACCGGAAGCTTGAGTCAAACTGAAGTATCTTGTCCTGTAAATCAGCCAGGGATTATGAAACGTAAGTTTCTTGATGAGGTGATGGTCAGTGATGAAGAAAGGAAACCCAGAGTTGTTCGAATTAAAAGCAATAAGGCAAATATATTGGATAGTGAAGAGGAGAGTGGAAAACGTGGTGATAAGTCTCAGAATGTGAAAGGGAAAAAGTTGGTTATAAATTTGGGACCACGGAAAATTAATGTAGCTAGTTCTCCGCTGTCTGATAATGCAAGCTTCCAAAGAGATCAAGATCTGGTTACTTCCAATGGAAATGAAAATCAAGCCCATTTGACGAAGGGAAACAAGTTTGCATTAGATAGACACGATGGAGCAAATAGACATATTGATGGTAAAGGGAGTAGGGTTGATTCTGGCCAATCAAAACATTTAAAGGTTTATGGAAGAGAAGGAAACACGATCAAGTTGGGAAAAGTAAAGCCGAGTGTTTCTGAATTCAACTTTACCTCTGGTAGAGGCAATATGTCTGATGGGTGTGAAGTTGCTCCTTTAGAGGGATCTCACATCATGCGGGGAAAACGTAGTACTCATGGAATGATCAACCAAGTTGGATTAAGTGCAACATCAAGAGGTGAAAGGACGTATTTGACGAAGCAGTCAGAAGGTAGCTCTGATGTATATGATGAGACACATGACGATAATCAAGCTCCTTCACATTCTTTGCCAAAAGAATCTAAACCCTTACTGAGATTTAAATTCAAAAGGCCTAGTGTTGAAAGTCAAAATTCTCATCAGGAAGAGGAGAAGACCACAGTCAAGGGCCAGAGGTCAAAAAGAAAGAGGCCTTCACCTTTTAAAGAAAGATCACTGTTTAATGACTCTGAAGGTGTAAGTCAATCTCCTGGAGAGAATATGAATCATGAGAACATGGATGCAAACTGGATTTTGATGAAATTGGGAAGTGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGGCATCCGATGATTCTTGGCACAAGGGAGAGGTGACTGACGTAGTTGAAGGCACCTCAGAGCTACATGTTACTTACGATGATGGAAATGTGAGTATCTTGGAACTCAGGAAGCAGGGAGTTCGTTTTGTTCCTCAAAAGCAAAAGAGATCGAAAACATGA 2574 0.4138 MAFHVACPITCRRICFCSLGFPRALNGAKNGTKDFLDEVAVLGDFLGENRKEDGTIQVVVPKVVPPPIEIVPVSGGGELVDESASMKAKRDALQRKGAAAMIAAEEYARKFESGDVVDTSGNLNGEEQGQSNVKVFCRMCNRVENEGSEKAKKMLSCKSCSKKYHRSCLKSWSNNRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTKCHSCASNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDHCQRWVHCQCDNISDERYHQFQVDGNLQYTCPTCRGECYQVKSLEDAVQELWRRKNIADKDLITSLRAAAGLPTQEEIFSISPYSDDEDSGPLKLKSDSARSLKFSFKNFSNNSPIKMNDYGKKSSNKKTAKKKDSLSFMSGKMDAHHSFEGHSDIRSLHSLDDMQSQRNERPDVYSSPATGSLSQTEVSCPVNQPGIMKRKFLDEVMVSDEERKPRVVRIKSNKANILDSEEESGKRGDKSQNVKGKKLVINLGPRKINVASSPLSDNASFQRDQDLVTSNGNENQAHLTKGNKFALDRHDGANRHIDGKGSRVDSGQSKHLKVYGREGNTIKLGKVKPSVSEFNFTSGRGNMSDGCEVAPLEGSHIMRGKRSTHGMINQVGLSATSRGERTYLTKQSEGSSDVYDETHDDNQAPSHSLPKESKPLLRFKFKRPSVESQNSHQEEEKTTVKGQRSKRKRPSPFKERSLFNDSEGVSQSPGENMNHENMDANWILMKLGSDAIGKRVEVHQASDDSWHKGEVTDVVEGTSELHVTYDDGNVSILELRKQGVRFVPQKQKRSKT* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1209 857 ProSiteProfiles Zinc finger RING-type profile. 275 329 IPR001841 -
Mal7g1209 857 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 246 IPR013083 -
Mal7g1209 857 PANTHER HISTONE ACETYLTRANSFERASE 2 851 - -
Mal7g1209 857 MobiDBLite consensus disorder prediction 524 539 - -
Mal7g1209 857 Gene3D - 793 840 - -
Mal7g1209 857 PANTHER PHD FINGER FAMILY PROTEIN 2 851 - -
Mal7g1209 857 ProSitePatterns Zinc finger PHD-type signature. 137 189 IPR019786 -
Mal7g1209 857 ProSiteProfiles Zinc finger PHD-type profile. 272 331 IPR019787 -
Mal7g1209 857 MobiDBLite consensus disorder prediction 765 780 - -
Mal7g1209 857 ProSiteProfiles Zinc finger PHD-type profile. 134 192 IPR019787 -
Mal7g1209 857 MobiDBLite consensus disorder prediction 679 696 - -
Mal7g1209 857 SUPERFAMILY FYVE/PHD zinc finger 126 197 IPR011011 -
Mal7g1209 857 MobiDBLite consensus disorder prediction 679 780 - -
Mal7g1209 857 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 331 IPR013083 -
Mal7g1209 857 MobiDBLite consensus disorder prediction 465 487 - -
Mal7g1209 857 MobiDBLite consensus disorder prediction 524 543 - -
Mal7g1209 857 SMART PHD_3 274 329 IPR001965 -
Mal7g1209 857 SMART PHD_3 191 237 IPR001965 -
Mal7g1209 857 SMART PHD_3 136 190 IPR001965 -
Mal7g1209 857 MobiDBLite consensus disorder prediction 459 487 - -
Mal7g1209 857 MobiDBLite consensus disorder prediction 410 430 - -
Mal7g1209 857 Pfam PHD-finger 274 329 IPR019787 -
Mal7g1209 857 MobiDBLite consensus disorder prediction 416 430 - -
Mal7g1209 857 MobiDBLite consensus disorder prediction 697 747 - -
Mal7g1209 857 SUPERFAMILY FYVE/PHD zinc finger 272 330 IPR011011 -
Mal7g1209 857 SUPERFAMILY FYVE/PHD zinc finger 181 242 IPR011011 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal7g1209 PHD 5.7e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1209 - - mtr:MTR_4g037745 1556.58