Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1148 ATGTTGCAAGATACCGGTGCCTGTGCTAATACAGAAGCTCTGACAACTCTGATAAACCAAAGGAATGATGCCCCTATGCCCCAAATTGTGATGCAAGAAAAAAGTAGCTTGCCAATTAAAAATATAACAAACATAATGAGAAAAGGTTTGCCACCAAATGCAAAAATCTCTAAAAGTGCAAAGGAGACTATAGAACAATGTACATTAAAATTCATAAGTTGGGTAACAGAAAAAGCCAAGGAACGTTGCCAAAGTGAATCTAGAGTAATTTTGGGTGCAGATGACTTGTTGTGGGCAATGGAGGCTGTGGGTTATAGGATCCACTTGGAGGTTCTTAATTTATATCTCAAACGTTATCGTTGTAGTAATGCTACTTGTCCCACCATATCACCACCTTATTCAAACTCAATTGTCAAAATGTTTGAAGAAGAAATGCATATTGATGAGATATGGGCTGAATTGGATAATTTGGATCTTGGTTTCTCAAACAATACTTTGCCCAACATAGATCCTTCTTCTCAATTCAACTTTGATGGCATGATTGATGAGAATGATGATAAAATGAACGACTGA 573 0.3682 MLQDTGACANTEALTTLINQRNDAPMPQIVMQEKSSLPIKNITNIMRKGLPPNAKISKSAKETIEQCTLKFISWVTEKAKERCQSESRVILGADDLLWAMEAVGYRIHLEVLNLYLKRYRCSNATCPTISPPYSNSIVKMFEEEMHIDEIWAELDNLDLGFSNNTLPNIDPSSQFNFDGMIDENDDKMND* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1148 190 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 20 133 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mal7g1148 190 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 20 133 - -
Mal7g1148 190 Gene3D Histone, subunit A 28 131 IPR009072 GO:0046982
Mal7g1148 190 SUPERFAMILY Histone-fold 35 130 IPR009072 GO:0046982
Mal7g1148 190 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 100 IPR003958 -
Mal7g1148 190 PRINTS CCAAT-binding transcription factor subunit A signature 102 120 - -
Mal7g1148 190 PRINTS CCAAT-binding transcription factor subunit A signature 83 101 - -
Mal7g1148 190 PRINTS CCAAT-binding transcription factor subunit A signature 64 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1148 Mal-Chr7 36201401 36201973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1148 30 120 CCAAT-HAP3 Transcription Factor Family AT2G38880 49.451 1.88e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal7g1148 CBFD_NFYB_HMF 1.2e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1148 K08065 - jre:108985357 105.916