Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1114 ATGGTTATGAACGAAAGACCAACCAAGAGAATGAAAAGAAGAGTAACAGCCGATCTTTACGATTTTCTCTCATTCCCTATCGCCGCCGATGACTCCGCCGCCGTGCCGTTCCGTAGCGGTGTTTACCGGTTTCTCAACGATCATGCGAGGGCTACTTTTTCTCCTGCGCTTTTTCCCTCGTTGATGACGTGGCAGATCTTGTTACGTGTTGGGGAGGAGAGTGATCTTGGTTCTGGTTTGGTTACTCTCGACATTGTTGAAGAGGATGTTACGAGGTCCAGGAGTAATGTTTATTGTGATCAGTGTCGTGTTGTTGGATGGAGTGGTCATCCTGTATGTAGAAAGCGATATCACTTCATAATAAGGTCTGCAACTGATGCCAATGAAGCAAATCAAAGACCTTGTTCAAAATGTGGAACACTTGTCCAATTATCTGAAGAAAGGTGTAATTCATGTAATATTGACATTTCTGCTGATGATCTTGAGGAATGGTTGTTTCTTCAAATTGAAGATAACAACTCACATCTTCTGCATGGTGTTGTGCATGCTAATGGTTATGGTCACTTGCTTACTCTTAATGGAAGAGAAGGTGGCTCGGTGCTTCTCTCTGGAGCTGATATTATGGGTTTCTGGGATAGGCTCTGTGCTGCTATGTCTGTTAGGAAGGTTACTGTGATGGATTTGTCCAAGAAATTTGGACTGGATTATCGTTTGCTTCATGCAATCGCCAAGGGGCATTCATGGTATGGCAATTGGGGTTATGAATTTGGGACTGGCTGCTATGCTCTTACCAAAGATGCGTACACGAAGGCAGTGGATAACTTGTGCAACATGCAGTTGTCCTCATTTTTATTCCAGGATCGAGGACCTCAAAACCCTATACAGTCTGTTATTTCTTTTTACCAATCTTTGGCTGAAACTGAACTTCTCACAATGAAAGATCTCTTCTCCTTATTGTTGGAATTGGTTCACAAATTTTGTAAGCCCAGGAGTGCAAAGACTGCTAAACAGCATGAACTCGCCAGTCCCTGTAATATATTATGTGCATGGACGAGAAACGAAGTCGAAGATGTGCAACAGGCTTTGATCAAGTTATTGCTTGTATCAGGTGCCTGTAATGAGGCAAAATGGGTGACAAGGCAAACTCTTAAAGGGGCAGTGGGTAGGCGTATTGGATCTCCAGAGCTTCTTGACTTCAGTCTTAAGCACTTGCCAGGGAAACCAGTTGCAAATGGAATGATAGTTTGTTCCCGATGCAATCCCACATCTAGTGCTATCGAATTCAGATTGGGACCTTTGGCTAATGGATTTAGCTCCAATGTAAACTATCCTTCCGAAGATCAAGTGATTTCTGATTTGACTTTCTTATTTAATACAATTGTTCACCCTGAAAAAATGGTAAAATACAGACCAAAGATTATGAGGAAAACAGTGGCTGATTCAGCCAGAAAGCTTCTTGACTGTAAACAGTTTATGAAGGATTACAAAATTGATCAAGTGACCAAAGAACTGCCTTCAGCTCTCAAGGTCTGGTGTCATGTGGAGCTTTATGACCATCCTAGAGAAGACCGCCCATCACCACCGCCAGAGTTAATTGTATTGCCTTTAAATGCTACTGCTGAAGACCTTAAGGCCGAAGCCACTAAAGTTTTTCAAGATGTGTATGCAATGTACAAGAAATTTGAAGCTGAGGAGTTTCGAGGATATGGTTTAAAGCATGATTACACCGTAAAATTCCTTTTGGGAAAAACTGGATCAGTTACACTTCAAGGAAAATGCCCAGCCAAACATGGCTTAAACCAATTCCGAAAGGAACGAGGACCAGAAGAATGGAAAGTTGATTGCACTTGTGGTGCTAAGGATGATGATGGAGAAAAGATGTTAGCATGTGATACCTGTGGTGTCTGGCAGCATACCAGATGTGCTGGAATTGGCAATTCTGATGGGCTGCCTTCCAAGTTTGTATGCAAGAGATGCATTATCTCTTACCGTGTGGGAACCAAAGGAATGCCAGTCTCTAGTATGGGGGTCTCTAGTGTGGGAGACAGTGAGCCTTGTAAATTTAACACACATTGCAGAGATGAGGCAGTGGCAACAGATTCGGCATCTGTTTGTTGTAATAATATAGAAAATGTGAATTTTGGTGTAAGTTGA 2154 0.4243 MVMNERPTKRMKRRVTADLYDFLSFPIAADDSAAVPFRSGVYRFLNDHARATFSPALFPSLMTWQILLRVGEESDLGSGLVTLDIVEEDVTRSRSNVYCDQCRVVGWSGHPVCRKRYHFIIRSATDANEANQRPCSKCGTLVQLSEERCNSCNIDISADDLEEWLFLQIEDNNSHLLHGVVHANGYGHLLTLNGREGGSVLLSGADIMGFWDRLCAAMSVRKVTVMDLSKKFGLDYRLLHAIAKGHSWYGNWGYEFGTGCYALTKDAYTKAVDNLCNMQLSSFLFQDRGPQNPIQSVISFYQSLAETELLTMKDLFSLLLELVHKFCKPRSAKTAKQHELASPCNILCAWTRNEVEDVQQALIKLLLVSGACNEAKWVTRQTLKGAVGRRIGSPELLDFSLKHLPGKPVANGMIVCSRCNPTSSAIEFRLGPLANGFSSNVNYPSEDQVISDLTFLFNTIVHPEKMVKYRPKIMRKTVADSARKLLDCKQFMKDYKIDQVTKELPSALKVWCHVELYDHPREDRPSPPPELIVLPLNATAEDLKAEATKVFQDVYAMYKKFEAEEFRGYGLKHDYTVKFLLGKTGSVTLQGKCPAKHGLNQFRKERGPEEWKVDCTCGAKDDDGEKMLACDTCGVWQHTRCAGIGNSDGLPSKFVCKRCIISYRVGTKGMPVSSMGVSSVGDSEPCKFNTHCRDEAVATDSASVCCNNIENVNFGVS* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1114 717 ProSitePatterns Uncharacterized protein family UPF0054 signature. 178 188 IPR020549 -
Mal7g1114 717 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 1 682 - -
Mal7g1114 717 PANTHER PHD FINGER PLANT-LIKE PROTEIN 1 682 - -
Mal7g1114 717 CDD PHD_MMD1_like 614 659 - -
Mal7g1114 717 Pfam PHD-finger 615 660 IPR019787 -
Mal7g1114 717 SMART PHD_3 614 660 IPR001965 -
Mal7g1114 717 ProSitePatterns Zinc finger PHD-type signature. 615 659 IPR019786 -
Mal7g1114 717 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 600 663 IPR013083 -
Mal7g1114 717 SUPERFAMILY FYVE/PHD zinc finger 607 664 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1114 Mal-Chr7 33097199 33100042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1114 81 659 PHD Transcription Factor Family AT5G22260 29.672 1.75e-84 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal7g1114 PHD 1.4e-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1114 - - mtr:MTR_4g035550 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1114 7 33097199 33100042 Mal7g1114 7 33097199 33100042 ECH