Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1107 ATGACTCCAGTTAATTTGGCAGGACAATTTGGTGACACAACATACACCAAAGTTTTTGTTGGAGGGTTAGCTTGGGAAACTCAAAAAGAAACCATGAAGAAATATTTTGAGCAATTTGGTGAGATCTTGGAAGCTGTTGTCATCACTGACAAAGCCACTGGAAGATCCAAAGGCTATGGATTTGTCACTTTTCGTGAACCTGATGCTGCTATGAGAGCTTGTGTGGATGCTGCTCCTATAATTGATGGTAGGAGAGCTAACTGTAACCTTGCTTCTTTGGGTGTCCAAAGATCTAAGCCTTCAACTCCAAAGCATGGAGGAGGAGGTAGGAACTTTAGGGTAATGGGTTCTTTCCAGACAGGATTTGGAGGAGTGGGATCAGCATTTCCTTCAGCTGCAACCTTTCCTCATTATGCCATCCAGCAAGGGATACCTTATAATGTTTATGGGTACTCTTCTTACTCGCCAGATTATAGTTACCCTACGAGCTACTATGGTGTGTATGGTGGAGCAACAGCACAGTACCCTGTGTATGGAAGTGGACCAGCTGGAGGGATGATGACTGGTGGTGCAGCAGCAGCAGCTTACTACCCATATCTTCAATATGGTGAAGGAACCGGCGGCGCAACCACCGGCGGCTACACTTCTGGACAAGGTTATGGTGTCAACTACCCACCTCAGGTGTTTCAGTATTCTCCAATTGGTTCAACTGGTGGTTATGCTCAGCACTATGGAACACCCATTTCTCTTGCTCCTTCCCCTGCCGCCTTGCCATCAGGCGTGACAATGGCTCTACAAGCTCCAATTCCTCATCGTTAG 819 0.4664 MTPVNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPIIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMGSFQTGFGGVGSAFPSAATFPHYAIQQGIPYNVYGYSSYSPDYSYPTSYYGVYGGATAQYPVYGSGPAGGMMTGGAAAAAYYPYLQYGEGTGGATTGGYTSGQGYGVNYPPQVFQYSPIGSTGGYAQHYGTPISLAPSPAALPSGVTMALQAPIPHR* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1107 272 SMART rrm1_1 17 89 IPR000504 GO:0003723
Mal7g1107 272 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
Mal7g1107 272 SUPERFAMILY RNA-binding domain, RBD 12 112 IPR035979 GO:0003676
Mal7g1107 272 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Mal7g1107 272 PANTHER OS01G0876800 PROTEIN 1 267 - -
Mal7g1107 272 Gene3D - 7 112 IPR012677 -
Mal7g1107 272 PANTHER BOULE-RELATED 1 267 IPR037366 GO:0003729
Mal7g1107 272 CDD RRM_RBM24_RBM38_like 16 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1107 Mal-Chr7 32978304 32986797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1107 12 92 C2H2 Transcription Factor Family AT2G19380 43.210 1.19e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1107 - - adu:107477578 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1107 7 32978304 32986797 Mal7g1107 7 32978304 32986797 ECH