Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1061 ATGCAACCTATTTCTGGCCGTGGCGGTGGTGATGGTGGTGGTGGTTTGACACGGTTTAACTCAACTCCGGCGAGTTGGTTAGAAACATTTATTCTTAAAGAAGAGGAAGATGAAGGACAAGAAGACAACTTAAGTTTTACTCAACTGCTTTCTCATAATAACGTTGCTGGTCCTGACCCTTCAACTCCTGAGTCTCACCCATATTTATCTCACTACTACTCTTCACCACTTACTCCCACCTCTGCAAATGCTGCTAATAATCCCTTCACTCAGGGAGTTGAGGATAGTGGTATAGCACTGGACCTTAAAATGGACAAGATTTTAGAGGATTCAGTTCCTTGTAAGATTCGGGCAAAGCGTGGTTTTGCTACACATCCAAGGAGTATTGCTGAAAGGGTTCGAAGGACTCGTATTAGTGATCGCATAAGAAAACTTCAAGAACTTGTGCCAAACATGGATAAGCAAACAAATACTGCAGAGATGTTAGACGAGGCTGTAGCATATGTCAAGTTTCTACAAAATCAAATTGAGGAACTATCAGAACACCAAAGGAGGTGTAAATGCATGATTCACGAGTAA 579 0.4197 MQPISGRGGGDGGGGLTRFNSTPASWLETFILKEEEDEGQEDNLSFTQLLSHNNVAGPDPSTPESHPYLSHYYSSPLTPTSANAANNPFTQGVEDSGIALDLKMDKILEDSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQIEELSEHQRRCKCMIHE* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1061 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 190 IPR036638 GO:0046983
Mal7g1061 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 172 IPR011598 GO:0046983
Mal7g1061 192 PANTHER TRANSCRIPTION FACTOR BHLH117-RELATED 12 186 - -
Mal7g1061 192 Coils Coil 162 192 - -
Mal7g1061 192 MobiDBLite consensus disorder prediction 1 21 - -
Mal7g1061 192 Gene3D - 123 192 IPR036638 GO:0046983
Mal7g1061 192 Pfam Helix-loop-helix DNA-binding domain 127 173 IPR011598 GO:0046983
Mal7g1061 192 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 12 186 - -
Mal7g1061 192 MobiDBLite consensus disorder prediction 51 73 - -
Mal7g1061 192 CDD bHLH_AtbHLH_like 127 180 IPR045239 -
Mal7g1061 192 SMART finulus 128 178 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1061 Mal-Chr7 31098971 31102538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1061 3 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 46.798 6.58e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g1061 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1061 - - aprc:113865701 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g1061 7 31098971 31102538 Mal7g1061 7 31098971 31102538 ECH