Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1040 ATGGATGTTCTTCATTGCATGATTTCTCTTCTTGTACTTTATTCTCTTGTGTTAAACCCTTGTTATGGTCTCAACCGCAAATTATTTAATGTTTCTCAAATTCAAAATGATAATAATGATCAATGGCAAATGGCAATAGCTACATGGTCTGGAGCCCCAGATGGTAGGGGGGGTACATGTGGATATGGTGATAGGGTAAACAATCCTCCACTTTCTAAAATGGTATCTACTGGAGGGCCATCTCAGTTCTACGGCGCCCAATGTGGTGTTTGTTTTCAGGTAAAATGCACAGAAAATAGTGCATGCTCAGGAAATCCTGTGACTGTGATGATAATTGGTGATTGCCTTGATTGTGAAAAAGAATCTACCCATTTCGATCTAAGTGGAACTGCTTTTGGATCCCTTGCAAATAATGATCAAGCTGATAATCTTCGTAATGCTAGAAAAATTAATATTCAATATCAAAGGGTTGCATGCCCCTTTGGGAAATCAATACAATTTAAAGTTGATATTATAGCAAACTACAACTATTTTTGTATGAGAATAATAAACGTGACTGATATTGTAGAAGTTGCATTGAACCAATCCAACACATGGCTTCCAATGAATCATCTTATTGATCGGGGTGGACAATGGACTTTGAGCACAGGTGATTCACAGATACAAACTCCATTTTCCATTAAGCTCACAACAAATGAAAATGGAATTAACAAGACCATTGTAGCTGACAATGTGATTCCACAAAATTGGAAACCTATTAATTATCAATCAGGTTTAATTTTCTAG 786 0.3639 MDVLHCMISLLVLYSLVLNPCYGLNRKLFNVSQIQNDNNDQWQMAIATWSGAPDGRGGTCGYGDRVNNPPLSKMVSTGGPSQFYGAQCGVCFQVKCTENSACSGNPVTVMIIGDCLDCEKESTHFDLSGTAFGSLANNDQADNLRNARKINIQYQRVACPFGKSIQFKVDIIANYNYFCMRIINVTDIVEVALNQSNTWLPMNHLIDRGGQWTLSTGDSQIQTPFSIKLTTNENGINKTIVADNVIPQNWKPINYQSGLIF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1040 261 Pfam Lytic transglycolase 85 154 IPR009009 -
Mal7g1040 261 Pfam Expansin C-terminal domain 165 247 IPR007117 -
Mal7g1040 261 SUPERFAMILY PHL pollen allergen 163 252 IPR036749 -
Mal7g1040 261 Gene3D - 163 258 IPR036749 -
Mal7g1040 261 PRINTS Major pollen allergen Lol pI signature 234 251 IPR005795 GO:0005576|GO:0019953
Mal7g1040 261 PRINTS Major pollen allergen Lol pI signature 167 182 IPR005795 GO:0005576|GO:0019953
Mal7g1040 261 PRINTS Major pollen allergen Lol pI signature 136 151 IPR005795 GO:0005576|GO:0019953
Mal7g1040 261 PRINTS Major pollen allergen Lol pI signature 96 106 IPR005795 GO:0005576|GO:0019953
Mal7g1040 261 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 57 164 IPR007112 -
Mal7g1040 261 PANTHER EXPANSIN-LIKE PROTEIN B1 1 254 - -
Mal7g1040 261 SUPERFAMILY Barwin-like endoglucanases 39 161 IPR036908 -
Mal7g1040 261 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 189 258 IPR007117 -
Mal7g1040 261 PANTHER EXPANSIN-B3 1 254 - -
Mal7g1040 261 Gene3D - 26 159 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1040 Mal-Chr7 30751837 30760902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1040 24 252 Expansin Gene Family AT1G65680 45.833 9.26e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1040 - - gmx:100786475 257.299