Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g1018 ATGACTAGAACAAAGGTGAAACTTGCATACATTGTCAATGATGCTGCTAGGAAGGCAACATACAATAAAAGGAAGAAGGGTCTATTGAAGAAGGTTGATGAACTAAGCACTCTTTGCGGAATTGAGGCTTGTGCTATAGTTTATGGACCTTACGAGTCTCAACCGGAGATTTGGCCATCTCCACAAGGAGTTGAAGGTGTGCTCTCAAAATTCAAGACAATGCCAGAGTATGAGAAGAGTAAGAAAATCATGAACCAAGAGAGTTTCATGCAACAAAGGGTTTTGAAGGCTGAAGAAAAATTGAAGAAACAAAGGAAAGACAATAGGGAAAAAGAGATGACAATTCTCATGTCTCAATGTCTTAATGAAGGTAGAGTTGTGCAAAACAATATGTCAATAGTTGATTTGACTTATCTTACTTGGTTGATTGACCATAATTTGAAGAACATTGGTAGAAGGTTGGAAGAAGAAGAAGAAGAAGGTAATAATGGTCAATATCAAAGTCAAAATCAAATCATGAATACTCAAAACCAAATTCAACACCAAATGGTGGTGGCACCACAACCACCATTAGCAGCATCTAGGAGTGAAGAAATGGCAATGATGGGTCATGGCCATTTTGGGATGCCTATGGATAATGGTGACATTGTTCAAAGGCAAGTATTAATGGATGAGACAATTCCATTCGGTGAGGTCAATTCTGTATTTTGTCCTGATCTACTACCTTGA 729 0.3813 MTRTKVKLAYIVNDAARKATYNKRKKGLLKKVDELSTLCGIEACAIVYGPYESQPEIWPSPQGVEGVLSKFKTMPEYEKSKKIMNQESFMQQRVLKAEEKLKKQRKDNREKEMTILMSQCLNEGRVVQNNMSIVDLTYLTWLIDHNLKNIGRRLEEEEEEGNNGQYQSQNQIMNTQNQIQHQMVVAPQPPLAASRSEEMAMMGHGHFGMPMDNGDIVQRQVLMDETIPFGEVNSVFCPDLLP* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g1018 242 Gene3D - 13 96 IPR036879 GO:0003677|GO:0046983
Mal7g1018 242 SUPERFAMILY SRF-like 2 94 IPR036879 GO:0003677|GO:0046983
Mal7g1018 242 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 199 - -
Mal7g1018 242 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 51 IPR002100 GO:0003677|GO:0046983
Mal7g1018 242 Coils Coil 94 114 - -
Mal7g1018 242 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Mal7g1018 242 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 1 199 - -
Mal7g1018 242 CDD MADS_SRF_like 2 85 IPR033897 GO:0000981|GO:0000987|GO:0045944
Mal7g1018 242 ProSiteProfiles MADS-box domain profile. 1 49 IPR002100 GO:0003677|GO:0046983
Mal7g1018 242 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Mal7g1018 242 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g1018 Mal-Chr7 29643863 29644591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g1018 1 190 Type I MADS-box Gene Family AT5G48670 50.000 2.19e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal7g1018 SRF-TF 3.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g1018 - - mtr:MTR_4g032620 278.1