Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0949 ATGTCTCAATCTCAAGCTTCTTCTTCTTCTAATGATTCAGACATAGATAATAATGATTCAGGTTGTTGTTCCAGTAACAGATCTGATGCTTCTGGAGTAGCTGAGCTGAAACTGTACAGAGCTTTTATATTCTCTGTTCCAATTTTCTTCACTTTGATTCTTCTTTTTCTTTTCTATGTTTTTTATTTGAGACCAAGAAGAGTTGATTGGTCTTCTATTAGGATGAGGTCTGTTTCTGTTCTTCAACATCATCATAATAACAATGCCACCTCCACTTCTGATTTGGGGTTGAAGAAAGAACTGAGAGAGATGCTGCCTATTATTGTGTACAATGAAAGCTTCTCCGTCAAAGATACACAATGCTCAGTATGCCTTTTGGACTACCAACCAGATGACAGACTTCAACAGATACCTGCATGCGGCCATACGTTTCACATGAGCTGCATTGATCTTTGGCTTGCCAGCCACAACACCTGCCCTCTTTGCCGTTTGTCGCTACTAAGTACCACGAAATCTTCAACAGAAACATCCGATATGCAGGCTACAAGCAATCAAGAAATGGAGATGCAACAGATCAATGAAGAAACAGTAGCAATGGAGTTTTCTGACTCAAGATCTACTACGCATCTAGAAACCACTGTCATTCAAAATGTCTCTGGAGAAGTTGCGACCGATGCTCACCGCATTGAAGTTGAAGAGCAAAATGTGCGAAACAACCAATAA 723 0.4011 MSQSQASSSSNDSDIDNNDSGCCSSNRSDASGVAELKLYRAFIFSVPIFFTLILLFLFYVFYLRPRRVDWSSIRMRSVSVLQHHHNNNATSTSDLGLKKELREMLPIIVYNESFSVKDTQCSVCLLDYQPDDRLQQIPACGHTFHMSCIDLWLASHNTCPLCRLSLLSTTKSSTETSDMQATSNQEMEMQQINEETVAMEFSDSRSTTHLETTVIQNVSGEVATDAHRIEVEEQNVRNNQ* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0949 240 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Mal7g0949 240 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 8 203 - -
Mal7g0949 240 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 8 203 - -
Mal7g0949 240 SMART ring_2 121 162 IPR001841 -
Mal7g0949 240 Pfam Ring finger domain 120 163 IPR001841 -
Mal7g0949 240 SUPERFAMILY RING/U-box 105 169 - -
Mal7g0949 240 CDD RING-H2_EL5_like 120 163 - -
Mal7g0949 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 169 IPR013083 -
Mal7g0949 240 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0949 Mal-Chr7 26288602 26291868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0949 28 167 C3H Transcription Factor Family AT4G10150 60.839 8.52e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0949 K19039 - gmx:100794211 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0949 7 26288602 26291868 Mal7g0949 7 26288602 26291868 ECH