Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g0934 ATGGAGCCTTTGGATCATCAAACTACTACACCATCAGTAGTCGAATTTGATTCTGTATTGGAAGAACTTGAATCCGCGGAAGAAAATATACGGAATCGAATCATACACCTTGAAGCAATTACTTCGAGAGCGAGGCAGCGCCGGGGGTTGCCGCAGAGGCATTCTCCGATTCAGATAACAAATGTTACTGCAGAAGCTGCAGCGACAGATGATGTTCAAGGTGAAGAAGAACGAAGTGAGGAGCGGAATGATGTTGAGGAGGAAAGAATAGTTGAAAATGTGAAAGGAGGGAAGAGGAAAAGTGCGCATTTGATAGCGAAAGCTTTGGGGATGGAAGAGATTGATGATGGTAAAGTGGAGGAGAGTAGTGGGAATTTTTTTGATTGCAATATTTGTTTGGATATTGCAAGAGATCCCGTTTTAACATGTTGTGGTCATTTGTTTTGTTGGCCGTGTTTCTATCAGTTATCGTATGCGTATTCGAAAGCGAAGGAATGTCCTGTTTGTAAAGGAGAGGTTACTGAATCGGGTATTATTCCGATTTATGGGAATGGAGGTGGCGGTGATCGTCAGATGGAAATGAAAGAAGCCGGTTTGAGAGTTCCTCCTCGACCTAAGGCACCTAGAGTTGAGAGTATTAGACAGAAGTTGATAACCCAAGGAGCATCCTCTTCTTCTATTGTCCAAAGTATTCGGCGGTTTCATAACCGAATTGGTGGATTTGGAGAGCAAGTTCAGTTAGAAAGCCCTAATACAACAGCTGATAGAAATAATGGTTTGCTCGGTCAGTCTAGCACACAGACAGACAATAATCAACATGATGGTTCTCAACAGGTTTCAAGGTTGCTGGAGCAAGGAGCATCTTCGTTTTCGTCACTTTCATCAGCATTAAATTCTGCAATGGATTCTGCTGAAAGATTAGTTCAGGACCTTGAGTCGTATATCCATGGTCACAATGTAGGAGAAAGCAGAGAGCAAAATCCTCGTGCTGTAAATAGAAATTCAACTTCTAGTGTTGCTGCTGCAAACACGTCAGAGAGTCGTGCTCAAGATGTTGTGGCTGTGACCGATTCGGTAGCTGCAGCAGCTTCTGTATCTCCTTTAAGTAGGAATGTTGACAATATCGCTGTTACGGGCTCAGAAATTCAGACAACTGATAGAAATGTACATATTATTTCGCTAGACCCTTCTTCATCGACTGGTAGAAGAGGAAATCACATTTCAAGACAAGTTTCAAATGAACCAACAAGAAGAAGAAGAAGATTGAGATGA 1272 0.4237 MEPLDHQTTTPSVVEFDSVLEELESAEENIRNRIIHLEAITSRARQRRGLPQRHSPIQITNVTAEAAATDDVQGEEERSEERNDVEEERIVENVKGGKRKSAHLIAKALGMEEIDDGKVEESSGNFFDCNICLDIARDPVLTCCGHLFCWPCFYQLSYAYSKAKECPVCKGEVTESGIIPIYGNGGGGDRQMEMKEAGLRVPPRPKAPRVESIRQKLITQGASSSSIVQSIRRFHNRIGGFGEQVQLESPNTTADRNNGLLGQSSTQTDNNQHDGSQQVSRLLEQGASSFSSLSSALNSAMDSAERLVQDLESYIHGHNVGESREQNPRAVNRNSTSSVAAANTSESRAQDVVAVTDSVAAAASVSPLSRNVDNIAVTGSEIQTTDRNVHIISLDPSSSTGRRGNHISRQVSNEPTRRRRRLR* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g0934 423 ProSiteProfiles Zinc finger RING-type profile. 129 170 IPR001841 -
Mal7g0934 423 Pfam Zinc finger, C3HC4 type (RING finger) 128 175 - -
Mal7g0934 423 MobiDBLite consensus disorder prediction 245 278 - -
Mal7g0934 423 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 8 352 - -
Mal7g0934 423 SMART ring_2 129 169 IPR001841 -
Mal7g0934 423 MobiDBLite consensus disorder prediction 71 87 - -
Mal7g0934 423 CDD RING-HC_AtRMA_like 127 171 - -
Mal7g0934 423 Coils Coil 20 40 - -
Mal7g0934 423 MobiDBLite consensus disorder prediction 394 423 - -
Mal7g0934 423 MobiDBLite consensus disorder prediction 318 349 - -
Mal7g0934 423 MobiDBLite consensus disorder prediction 66 87 - -
Mal7g0934 423 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 201 IPR013083 -
Mal7g0934 423 SUPERFAMILY RING/U-box 124 182 - -
Mal7g0934 423 MobiDBLite consensus disorder prediction 394 411 - -
Mal7g0934 423 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 8 352 IPR045103 GO:0005783|GO:0006511|GO:0061630
Mal7g0934 423 MobiDBLite consensus disorder prediction 325 349 - -
Mal7g0934 423 MobiDBLite consensus disorder prediction 243 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g0934 Mal-Chr7 25883504 25885797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g0934 108 366 C3H Transcription Factor Family AT3G58030 37.377 9.07e-41 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g0934 K10666 - gmx:100793230 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g0934 7 25883504 25885797 Mal7g0934 7 25883504 25885797 ECH